KEGG   Streptococcus salivarius CCHSS3: SALIVB_1875
Entry
SALIVB_1875       CDS       T01580                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ssr  Streptococcus salivarius CCHSS3
Pathway
ssr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SALIVB_1875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssr03400]
    SALIVB_1875
DNA repair and recombination proteins [BR:ssr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SALIVB_1875
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SALIVB_1875
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_21 AAA_33 AAA_23 AAA_22 DnaJ_CXXCXGXG AAA_14 RACo_linker BCA_ABC_TP_C Viral_helicase1 NACHT cobW MMR_HSR1 Septin NB-ARC AAA_18 PRK GCE_fung IIGP MeaB NTPase_1 DUF87 HUTI_composite_bact
Other DBs
NCBI-ProteinID: CCB94131
LinkDB
Position
complement(1958291..1961116)
AA seq 941 aa
MQDKLVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARVGVPY
CPNGHGAIQSSSVEQIVDEVLALPERTRMQILAPIVRRRKGQHKAVFDRVQKDGYVRVRV
DGEIYDVTEVPELSKSKMHNIEVVVDRLVNKDGIRSRLFDSVEAALRLADGYLIVDTMDD
NELLYSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDMDLVVPDASKTL
REGALAPWNPISSNYYPAMLEQAMEQFGVDMDTPFENLKKEEQDLILYGSGDREFHFHYV
NDFGGVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYMNELSCPTCHGYRLNEAALSV
RVGGENGLNIGQISDLSISDHLKEIDNLELGENEGVIARPIVKEIKDRLTFLNNVGLNYL
TLSRMAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLG
NTLIVVEHDEDTMREADWLIDVGPGAGAFGGQIMASGTPEEVAKNKKSITGQYLSGAKSI
PVPTERRVGNGRFIEVTGASENNLKNVSVQFPLGKLIAVTGVSGSGKSTLVNGILKKKIA
QELNRNSEKPGKHKSVTGIEHIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVRY
KGKNIAEILDMTVDDAVDFFAAIPKIARKVQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLQRFADDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGTIVATGTPEEVAAVPESYTGQYLKEKLI
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcaagataagttagtgattcatggagcaagagctcacaatttaaaaaatatcgatgtg
gagattccacgtgataaactggtggtggtgacgggcttgtcaggttctggtaagtcttct
ttggcctttgataccatctatgctgaggggcaacgtcgctatgtggaaagtctctcagcc
tatgctcgccagtttttgggaaatatggagaaacctgatgtggactcgattgatggtttg
agtcctgccatctccattgaccagaaaacaacaagcaaaaaccctcgttcgacggtcgga
acggcaacagagattaatgactatcttcgtctcctttatgcgcgtgtgggtgttccctat
tgtcctaatggtcatggcgctattcagtcatcctctgtagaacagattgtggacgaggtt
ctagctcttcctgagcgtacgcgtatgcagattttagcgccaattgttcgtcgtagaaaa
gggcaacacaaggccgtttttgatcgtgtgcagaaggacggttatgttcgtgttcgtgta
gatggtgagatttacgatgtcacagaagtgccagagttgtctaagtctaagatgcataat
atcgaagtggttgtggaccgcttggtgaataaggatggtatccgtagtcgtctctttgat
tcggtggaggcggccctacgtttagcagatggctacttgattgtggatactatggatgat
aatgagctgctttactcagaacattattcttgtccggtttgtggcttcacagtgccagag
ttggaacctcgtctcttttcattcaatgcgccattcggctcttgtccgacctgtgatggt
ttgggtaataaactggaagttgatatggatttggtcgttcctgatgctagtaagacctta
cgtgaaggtgctctggcgccttggaatcctatttcgtccaactattatccagctatgctt
gagcaggctatggagcagttcggcgtggatatggatacgccatttgaaaatcttaaaaaa
gaagaacaagatttgattctctacggatctggggatcgtgaattccatttccattatgtt
aatgattttggtggggtgcgtgatattgacattccttttgaaggggttgtgactaatatc
aatcgtcgctatcacgagaccaatagtgatttcactcgcaatgtcatgcgaggttatatg
aatgagctgtcatgtccaacttgtcatggctatcgtcttaatgaagcggcactctcagtt
cgtgttggtggtgagaatggcttaaatattggtcaaatctctgatttgtctatttcagat
catcttaaggaaatcgataaccttgaattaggtgaaaatgagggagtgatcgctcgtcca
attgttaaggaaatcaaggatcgcttgactttcttaaataatgtaggtcttaattatttg
actctctctcgtatggctggaaccctttcaggtggtgagagtcagcgtatccgtttggcg
acacagattggctctaacctttctggagtcctatatgtgttggatgagccttctattggg
cttcatcagcgtgataatgatcgcttgatttcaagtcttaaaaaaatgcgtgacctgggc
aacaccttgattgtggtagagcatgatgaagataccatgcgtgaggctgactggcttatc
gatgtgggacctggtgctggtgcttttggtggtcaaatcatggcctctggaaccccagag
gaagtggctaagaacaagaaatcaatcactggtcaatatctgtcaggtgccaaatcaatt
cccgtaccgacggaacgtcgtgtaggtaatggtcgttttatcgaggttacaggagctagc
gaaaataaccttaagaatgtgtctgtccagtttccacttggaaagttgattgcagtcaca
ggtgtttctggttcaggaaaatcaactttggttaacggaattctcaagaaaaaaattgcc
caagagctcaatcgcaatagtgagaagccaggtaaacacaaatcagtgacaggaatcgag
catatcgagcgtttgattgatattgaccaaagtccaattgggcgtacacctcgttctaat
ccagcgacttacacaggcgtctttgacgatattcgtgatctttttgcccaaaccaatgaa
gccaagattcgaggttacaagaaggggcgtttctctttcaatgtcaagggtggccgttgt
gaagcctgctctggtgatggtattatcaagattgagatgcactttttgcctgatgtttat
gtcccttgtgaggtttgtcatggcacacgctataattctgagaccctagaggttcgttat
aaagggaaaaatatcgcggagattctggatatgacagttgatgacgcagttgacttcttt
gcggctattcctaagattgctcgtaaggtgcagacgatcaaggatgtgggacttgggtat
gtgaccttgggacaaccagcaacaaccctctcaggtggtgaagcacaacgtatgaaactg
gctagtgagttgcacaaacgctctactgggaagtccttctacattctggatgaaccgacg
actggtctccatacagatgacattgcacgtcttttgaaggtgcttcagcgttttgcggat
gatggcaacactgttctcgtgattgagcacaatctggatgttatcaagaccgcagaccat
atcattgatttgggtcctgaaggcggtgtcggtggaggtaccatcgtagctacagggact
ccagaagaggtagcagctgttccagaaagctacacaggacaatatctgaaagaaaaattg
atataa

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