Streptococcus salivarius CCHSS3: SALIVB_2035
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Entry
SALIVB_2035 CDS
T01580
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (Transcriptase subunit alpha) (RNA polymerase subunit alpha)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SALIVB_2035 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssr03021
]
SALIVB_2035 (rpoA)
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_2035 (rpoA)
Enzymes [BR:
ssr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SALIVB_2035 (rpoA)
Transcription machinery [BR:
ssr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SALIVB_2035 (rpoA)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SALIVB_2035 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
CCB94282
LinkDB
All DBs
Position
complement(2117028..2117966)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN
PDHYLFTIAEGASLKATMTVATNRGYVPADENKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTDVAKATDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaaa
tttgtcatcgaaccactagaacgtggttatggtacaactttgggtaactctcttcgtcgt
gtacttttgtcatcacttccaggtgctgccgtaacatcaattaagattgatggagtactc
cacgaatttgataccgtaccaggcgtccgtgaagacgtgatgcaaatcatccttaatatt
aaaggacttgctgtaaaatcttacgtcgaagacgaaaaaacaattgaacttgatgtccaa
ggtccagctgaagttactgctggagatatcttgactgatagcgacattgaaattgttaac
cctgatcattatcttttcactatcgctgaaggagcttctttgaaagcgactatgacagta
gctacaaaccgtggttatgttccagcagatgaaaacaagaaagatgatgcaccagtggga
acattggctgtagattcaatctacacaccagtgaaaaaagtcaattatcaagttgaacct
gcccgtgtaggtagcaacgatggttttgataaattgacaatcgaaatcatgacaaacgga
acaatcatccctgaagatgccctcggtctctcggctcgcgttttgattgaacacttgaac
ttgtttactgaccttactgatgttgctaaagctactgatgtaatgaaagaaactgaaaaa
gtgaacgatgaaaaggtgcttgaccgtaccatcgaagaacttgatttgtctgtacgctca
tataactgtttgaaacgtgccggtattaataccgttcatgatttgacagaaaaaactgag
cctgaaatgatgaaagtccgtaacctaggtcgtaaatctcttgaagaagtcaaagttaag
ttggctgatcttggacttggactcaaaaacgataaataa
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