Streptococcus suis SC84 (serotype 2): SSUSC84_1693
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Entry
SSUSC84_1693 CDS
T00937
Symbol
csdB
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sss
Streptococcus suis SC84 (serotype 2)
Pathway
sss00450
Selenocompound metabolism
sss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sss00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SSUSC84_1693 (csdB)
Enzymes [BR:
sss01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SSUSC84_1693 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SSUSC84_1693 (csdB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
DUF2492
Motif
Other DBs
NCBI-ProteinID:
CAZ52469
LinkDB
All DBs
Position
complement(1771233..1772456)
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AA seq
407 aa
AA seq
DB search
MDLERIRKEFSILDQVVNDEPLVYLDNAATTQKPQQVLDVLADYYQKDNANVHRGVHTLS
ERATTRYEAARQKVADFIQAKSSKEILFTRGTTTSLNWVAQFAKEILQPDQEVIISVQEH
HSNIIPWQQACQQTGAKLRYVTLKDGELDMDHLRSLLSSKTKFVSLAHVSNVLGGVVPIG
EIAELVHQVGAYLVVDGAQSVPHMGVNVQELDVDFYAFSGHKMLGPTGIGILYGKEELLN
LMSPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNIAGAIGLGAAIDYLTEIGMDAIQAH
EAELVDYVFPKLQAIPGLTIYGSQDLSKRTGVIAFNLDDLHPHDVATALDYEGVAVRAGH
HCAQPLLRYLQVPATVRASFYIYNTKADCDKLVEAIIKTKEFFNGPI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaacgcattcgcaaggaattttcaatcctagaccaagttgttaacgatgag
ccgctggtctatttggacaatgcggcgaccactcaaaaaccgcagcaggtactagatgtg
ctggcggattattaccagaaggacaatgccaatgtccaccgtggcgttcacaccctttcg
gaacgggcaactactcgctacgaggcggctaggcagaaggtggcagattttattcaggcc
aagtctagcaaggaaattctctttaccagaggaacgaccactagtcttaactgggtggct
cagtttgcaaaggaaattctccagccagaccaggaagtgatcatctcggtccaagagcac
cactccaatatcatcccttggcagcaagcctgtcagcaaacgggtgctaagctccgctat
gtgaccctaaaagacggcgagctagacatggaccatctgcggtcgctactatcttctaag
accaagttcgtctccctggcccacgtatccaatgtcctaggtggcgtggttcctattggg
gaaatagcagagctggtgcatcaagtcggtgcctacttggtggtggacggagcccagtca
gttccccacatgggcgtcaacgtgcaagaattagacgtggatttctatgccttttcaggt
cataaaatgttgggaccgacaggaattggcattctctacggcaaggaagaattgctcaat
ctcatgtcgccagttgaattcggcggtgaaatgattgactttgtctatgagcagtcagct
acttggaaggaattgccttggaagtttgaggcaggaacgcccaatattgcaggtgcgatt
ggtctgggagcggccattgattacctgaccgaaattggtatggacgctatccaggcccac
gaggcagaactggttgactatgtctttccaaaattgcaggctattccaggcttgaccatt
tatggcagtcaggacctgtccaagcggacgggagttattgcctttaacttggacgacttg
catccacacgatgtggcaactgctctggactatgaaggtgttgctgtgcgggcaggccac
cattgtgcccaaccgcttctcagatatttgcaggtgcctgctactgtacgagcaagtttt
tacatttacaataccaaggctgactgtgataagttggtcgaggcaatcatcaagacaaag
gagtttttcaatggccctatctag
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