Streptococcus suis ST3 (serotype 3): SSUST3_0101
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Entry
SSUST3_0101 CDS
T01470
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sst
Streptococcus suis ST3 (serotype 3)
Pathway
sst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSUST3_0101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sst03021
]
SSUST3_0101
03400 DNA repair and recombination proteins [BR:
sst03400
]
SSUST3_0101
Enzymes [BR:
sst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSUST3_0101
Transcription machinery [BR:
sst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSUST3_0101
DNA repair and recombination proteins [BR:
sst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSUST3_0101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
DUF7412
Motif
Other DBs
NCBI-ProteinID:
AEB80585
LinkDB
All DBs
Position
88267..89205
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGPAEVTAGDILTDSDIEIVN
PDHYLFTIADGATFKAVLTVNSGRGYVPAEDNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTLEINTNGTIVPEDALGLSARILMEHLGLFTDLTEVAKSAEVMKEAEV
ASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKKDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattacggcaga
tttgtaatcgaaccattagaacgtggttacggtacaactcttggtaactctcttcgtcgt
gtacttcttgcctcacttccaggtgctgcagtgacatcgattaaaattgatggtgtactc
cacgaattcgacacagttccaggtgttcgtgaagatgttatgcaaattattcttaacatc
aaaggcattgctgtaaaatcttatgtcgaagacgaaaagaaaattgaacttgatgtagta
ggtccagctgaagtaacagcaggagacattcttacagatagtgacattgaaattgtaaac
cctgaccattatctctttaccattgctgatggtgccacttttaaagctgttttgactgtc
aattcaggtcgtggttatgtaccagctgaggataataagaaagatgatgcaccagtggga
acacttgctgtagattctatctatacgccagtgaagaaagtcaattatcaagttgaacca
gctcgtgttggtagcaacgatggttttgacaaattaacacttgaaatcaacacaaatggc
accattgttccagaagatgctttaggtctttctgcacgtattttgatggagcacttaggt
ctcttcactgacttgactgaagttgcaaaatctgcagaagtgatgaaagaagctgaagtg
gcttcagatgatcgtatgcttgatcgtacgattgaagaattggatctatctgttcgctca
tataactgtctgaaacgtgcaggcattaacactgtattcgacttgacagagaaaactgag
ccagaaatgatgaaagtgcgcaatcttggtcgcaagagtcttgaagaagttaaagttaaa
ttggctgatcttggtctaggattgaaaaaagataaataa
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