Streptococcus suis ST3 (serotype 3): SSUST3_0677
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Entry
SSUST3_0677 CDS
T01470
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sst
Streptococcus suis ST3 (serotype 3)
Pathway
sst03410
Base excision repair
sst03430
Mismatch repair
sst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSUST3_0677
03430 Mismatch repair
SSUST3_0677
03440 Homologous recombination
SSUST3_0677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sst03400
]
SSUST3_0677
DNA repair and recombination proteins [BR:
sst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SSUST3_0677
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SSUST3_0677
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SSUST3_0677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
AlaDh_PNT_C
Toprim
ThiG
PIGA
Motif
Other DBs
NCBI-ProteinID:
AEB81136
LinkDB
All DBs
Position
680893..683106
Genome browser
AA seq
737 aa
AA seq
DB search
MIKPNYDWQLLTGFSDEQFIKIAKKEGVDPVAAKLLYERGIHSAEELHTFLQPSLEDLHD
PYLLHDMDKAVERIRRAIEDYEQILIYGDYDADGMTSASILKETLEEMGAEVQVYLPNRF
TDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQEMGVDVVVTDHHSMQETLPN
AYAIVHPEHPEGNYPFKHLAGCGVAFKLACALLETVHADLLDLVAIGTIADMVSLTDENR
VMVKYGLSLLKQTERAGLQELIKIAGIDIDSIDEETVGFQLAPRLNALGRLDDPNPAIEL
LTGFDDEEAHQIALMIDSKNVERKDVVQAIYDEAKTMLRQDRPVQVLAKEGWNPGVLGIV
AGRLLEELQQPVIVLSIEDGKAKGSARSVEAVDIFKALKDHQDLFIAFGGHAGAAGMTLE
VDKLEELALTLTDYIIENKLDLSSKSSLVLDEELDLEELTLDTLKSFEKLAPYGRDNKKP
VFYIRDFQVESARTMGQNNAHLKLRISKGAAGFDVVAFGKGNLALEFSQAKGLELAVTLS
VNQWNGNTSLQLMLVDARVNGVQLYNIRGKQHPIPAGVPILDIENPVADNKAIVLANLPE
DLSSLRSYFQEREFEAIYFKNEIAKPYYLDGYGSREQFAKLYKTIYQFDEFDVRYKLKDL
AVYLKIKDSLLVKMIQIFQELEFVTITDGVMRVNKDAQKREISESQIYQELKETVIQQEL
MALGTVQEIYEWLCGRV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaacccaattatgactggcaattattgaccggtttttctgatgaacaatttatc
aaaattgctaaaaaagaaggagtggacccggtagcggctaagttgctgtatgaacgtggc
atccattcggcggaagaattgcatactttcttacaaccaagcttagaagatcttcacgat
ccctatttactacatgatatggacaaggcggtagagcggattcgccgagcaatcgaagat
tacgaacaaattttgatttatggagattatgacgcagacggcatgacctcggcatctatt
ctgaaagaaactttggaggaaatgggggcagaagtccaagtttatcttcccaaccgtttc
acagatggctatgggccgaatcagtcagtttacaagtattttatcgagcaacaggggatt
tctcttattgtgacggtggacaatggcgtagcgggtcatgaagcgattgcctatgcccag
gaaatgggtgtcgatgttgtcgtgacagaccaccattccatgcaggaaacccttcccaat
gcctatgcgattgtacatccagagcatccagagggaaattatcccttcaaacatttggcg
ggctgcggtgtggcttttaaattggcctgtgctcttcttgaaactgttcatgcagacttg
ctggatttggtcgcaattggcaccatcgctgatatggttagcttgaccgatgagaatcgt
gtcatggtcaaatatggtctctcgcttctcaaacagactgagcgagcaggtttgcaagag
ttgataaagatagctggtattgacatagacagtattgatgaagaaacagttggtttccaa
cttgctccgaggttgaatgcccttggtcgactcgacgatcctaatccagccatcgaatta
ctgactggttttgatgacgaagaggcccatcaaattgctctcatgattgacagtaaaaat
gtagaacgcaaagacgtcgtccaagcaatttacgatgaagcaaaaaccatgctccgtcag
gatagaccggttcaagttctggctaaagaaggttggaacccaggtgttttagggattgta
gcaggacgcctactagaagaattgcagcaacctgttatcgtcttgtctattgaagatggt
aaggcaaaggggtcggctcgttcggttgaagcagttgacattttcaaggctcttaaagat
catcaggacctatttatcgcctttggtggtcatgctggtgcagcaggtatgaccttggaa
gttgacaaacttgaagaacttgctctgaccttgacagactacattatcgaaaataaattg
gatttatccagcaagtcttcgctggtcttagatgaagaattggatttagaggaattaacc
ctagatactctaaaatctttcgagaagcttgcgccttacggcagggataataaaaagcct
gtattctacatcagagactttcaggtggaatcagcaaggaccatggggcagaataatgcc
catttgaaactacgcattagtaaaggtgcggcaggttttgatgtggttgcttttggtaag
ggcaatctagccttggaattttcacaggccaagggcttagaactagctgtcaccttgtct
gtcaatcaatggaatggcaataccagtcttcagctcatgttggttgatgctcgggtcaat
ggtgttcaactttataatattcgtggaaagcaacatcctattcctgctggagtcccaatt
ttggatattgaaaatccagtagcagataacaaagcaattgtcttggctaacttgcctgag
gacctcagtagtctgcgtagctattttcaggaaagagaatttgaagccatttattttaaa
aacgaaattgccaaaccgtactatctagatggttatggtagccgagaacaattcgctaaa
ttgtataagactatttaccaatttgatgagtttgatgttcgctacaaactgaaagatttg
gctgtttacttaaaaattaaggacagtctattggttaaaatgattcagattttccaagaa
ttagaatttgtcacgattacggatggggtcatgcgggtcaacaaagatgcacagaagcga
gagatttcagaaagtcaaatatatcaagaattgaaagaaacagttatccaacaagagttg
atggcgcttggcaccgttcaggaaatttatgaatggctatgtggtcgcgtttga
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integrated database retrieval system
