Streptococcus suis ST3 (serotype 3): SSUST3_1723
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Entry
SSUST3_1723 CDS
T01470
Symbol
csdB
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sst
Streptococcus suis ST3 (serotype 3)
Pathway
sst00450
Selenocompound metabolism
sst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sst00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SSUST3_1723 (csdB)
Enzymes [BR:
sst01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SSUST3_1723 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SSUST3_1723 (csdB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
A2M_bMG2
DRHyd-ASK
SelA
Motif
Other DBs
NCBI-ProteinID:
AEB82136
LinkDB
All DBs
Position
complement(1714352..1715578)
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AA seq
408 aa
AA seq
DB search
MIDFESIRKDFSILDQVVNDEPLVYLDNAATTQKPQQVLDVLEDYYQTDNANVHRGVHTL
SERATARYEAARQKVADFIQAKSSKEILFTRGTTTSLNWVAQFAKEILQPDQEVIISVQE
HHSNIIPWQQACQQIGAKLRYVPLKDGELDVDSLKSILSEKTKFVSLAHVSNVLGGVVPI
GEIAELVHQVGAYLVVDGAQSVPHMAVNVQELDVDFFAFSGHKMLGPTGIGVLYGKEELL
NLMSPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNIAGAIGLGAAVDYLTEIGMDAIQA
HEAELVDYVFPKLQAIPGLTIYGSQDLSKRTGVIAFNLDDLHPHDVATALDYEGVAVRAG
HHCAQPLLRYLQVPATVRASFYIYNTKADCDKLVEAIIKTKEFFNGPI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgattgattttgaaagcattcgcaaggatttttcaatcctagaccaagttgttaacgat
gagccgctggtctatttggacaatgcggcgaccacccaaaaaccgcaacaggtactggat
gtactggaagattactaccagacagacaatgccaatgtccaccgtggagttcatactctg
tcagaacgggcaacggctcgctacgaggcggctcggcagaaggtggctgattttatccag
gccaagtctagcaaggaaattctctttaccagaggaacgaccaccagtctcaactgggta
gctcagtttgcaaaggaaattctccagccagaccaggaagtgataatctcggtccaagag
caccactccaatatcatcccttggcagcaagcctgtcagcaaataggtgccaagctccgc
tatgttccactaaaagacggcgagttggatgtggatagcctcaagtccatactctccgaa
aagaccaagttcgtctccctggcccacgtatccaatgtcctaggtggcgtggttcctatt
ggggaaatagcagagctggtgcatcaagtcggtgcctacttggtggtggacggagcccag
tcagttccccacatggctgtcaacgtgcaagaattagacgtggatttctttgccttttca
ggtcataaaatgttgggaccgacaggaatcggcgttctctacggcaaggaagaattgctc
aatctcatgtcgccagttgaattcggcggtgaaatgattgactttgtctatgagcagtca
gctacttggaaggaattgccttggaagtttgaggcaggaacgcccaatattgcaggtgcg
attggtctgggagcagccgttgattacctgaccgaaattggtatggacgctatccaggcc
cacgaggcagaactggttgactatgtctttccaaaattgcaggctattccaggcttgacc
atttatggcagtcaggacctgtccaagcggacgggagttattgcctttaacttggacgac
ttgcatccacacgatgtggcaactgctctggactatgaaggtgttgctgtgcgggcaggc
caccattgtgcccaaccgcttctcagatatttgcaggtgcctgctactgtacgagcaagt
ttttacatttacaataccaaggctgactgtgataagttggtcgaggcaatcatcaagaca
aaggagtttttcaatggccctatctag
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