Mammaliicoccus stepanovicii: SAMEA4384403_0788
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Entry
SAMEA4384403_0788 CDS
T06999
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03420
Nucleotide excision repair
sste03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4384403_0788 (pcrA)
03430 Mismatch repair
SAMEA4384403_0788 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_0788 (pcrA)
Enzymes [BR:
sste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384403_0788 (pcrA)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4384403_0788 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4384403_0788 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
AAA_22
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
SNV61972
UniProt:
A0A239YT74
LinkDB
All DBs
Position
1:780399..782579
Genome browser
AA seq
726 aa
AA seq
DB search
MNTLLDRMNDEQKQAVKTTQGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAKEMKERISNLVGPEAESIWISTFHSMCVRILRRDIDHIGIERNFTIIDPTDQKSV
IKEILKKENIDSKKYDPRTFIGAISNLKNELKTAEDAEKEANDFYNTMVASVYKGYQEKL
LRNHALDFDDLIMMTIRLFERVPEVLEFYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NICVVGDSDQSIYGWRGADIKNILSFEEDYPNAKTIYLERNYRSTKTILTAANEVIRNNS
ERKPKALWTDNTSGSKIQYYEAMTERDEAEYVIRQILKKKQDGYKNQDIAILYRTNAQSR
VLEETFLKSNIPYTMVGGTKFYDRKEIKDLLSYIRLVSNSNDDISFERIINVPKRGIGPS
AVQKIAQYASMNNLSYFDALGEVDFIGLSKKVTQEAVDFYEMMNNFMQQQEFLSITELVE
QILDKSGYRSMLENEQTIESQSRLENIDEFLSVPRDYEKNTPIEEQSLMNFLTDLSLVAD
VDNADLEAGVTLMTMHSAKGLEFKVVFIVGMEESIFPHFRSLKSGEEHEMEEERRIAYVA
ITRAEEELHVSHATTRTLFGKSQANVKSRFLNEIPDDLLDGVKPNMSFKSKQTVAPKRGY
ARRVNTPQQTESNWNVGDKVTHKSWGEGMVSAVNDKNGSVELDIIFKNEGPKRLLAQFAP
IEKKGE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattgttagatagaatgaatgatgaacaaaagcaagcagtcaagacaacacaa
gggccattattaatcatggcaggtgcaggaagtggtaagacgcgtgttttaacacataga
attgcatatttactagatgaaaaggatgtttcaccatacaatgttttggcgattacattt
actaataaagctgctaaagaaatgaaagaaagaattagtaatctagtaggtccagaagct
gaaagtatttggatttcaacattccactcaatgtgtgtaagaatcttaagacgtgatatt
gatcatattggaattgaacgtaactttacaattattgatccaacagatcaaaaatcagtt
attaaagaaattttgaaaaaagaaaatatagatagtaaaaaatatgatccaagaacattt
ataggcgcaatttctaatttgaaaaatgaactaaaaacagctgaagatgcagaaaaagaa
gcaaatgatttttacaatacgatggttgcaagtgtatataaaggttatcaagaaaaatta
ttgcgaaatcatgcactcgatttcgatgatttgattatgatgacaattaggttgtttgaa
cgcgtaccagaagtgttagaattttaccaaaataaattccaatatattcacgttgatgaa
tatcaagatacgaataaggcacaatatacgctcgtgaaactacttgcaagcaaatttaag
aatatttgtgtagtaggtgactctgatcagtctatatacggttggagaggtgcagatatt
aagaatattttatctttcgaagaagattatccgaatgctaagacgatttatttagaacga
aattatagatcaactaagacgattttaactgctgcaaacgaggttattcgaaacaattca
gaacgtaaaccaaaggcactttggactgataacacatcaggttcgaaaattcagtattat
gaagcaatgactgaaagagatgaagctgagtatgttattagacaaattcttaagaaaaag
caagatggatataagaatcaagatatagcaattttgtatagaacaaatgctcaatcacgt
gtacttgaagaaacatttttaaaatctaatattccgtatacgatggtaggcggcactaag
ttctatgaccgtaaagaaattaaagatttattaagttacattagactcgtttctaatagt
aatgatgatataagttttgaacgcatcatcaatgttccaaagagagggatcggtccatca
gctgttcaaaaaattgctcaatatgcaagcatgaataatttaagttactttgatgctcta
ggtgaagttgattttataggattatctaaaaaagtaacacaagaagcggtggacttttat
gagatgatgaataattttatgcagcaacaagaatttctatccatcacagaattagttgaa
caaattcttgataaatctggttatagaagcatgttagaaaacgaacaaacgattgaatct
caaagtagacttgaaaatatagatgaatttttatcagttcctcgagattatgagaaaaac
acaccaatagaggaacaatctttaatgaatttcttaactgatttatcacttgtagccgat
gttgataatgctgatttagaagctggtgttacgttaatgacaatgcactcagctaaagga
ctagaatttaaggttgtctttatagttggtatggaagaaagtattttccctcatttcaga
agtttaaagtctggtgaagagcatgaaatggaagaagaaagaagaattgcttatgtagca
attacacgagctgaagaagagttgcatgtttcacatgctacgacacgcactttgtttggt
aaatctcaagcaaacgtaaaatcaagatttttaaacgaaataccagacgatttactagat
ggtgtaaaacctaacatgtcatttaaatcaaaacaaactgtagcaccgaaacgaggatac
gcacgaagagttaacacaccacaacaaactgaatcaaattggaatgttggagataaagtt
acacataaatcttggggtgaaggtatggtaagtgcagttaatgacaaaaatggttcagtt
gaacttgatattatctttaaaaacgaaggaccgaagcgtttattagctcaatttgcaccg
attgagaaaaaaggagaataa
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