Mammaliicoccus stepanovicii: SAMEA4384403_1062
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Entry
SAMEA4384403_1062 CDS
T06999
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03030
DNA replication
sste03410
Base excision repair
sste03420
Nucleotide excision repair
sste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384403_1062 (polA)
03410 Base excision repair
SAMEA4384403_1062 (polA)
03420 Nucleotide excision repair
SAMEA4384403_1062 (polA)
03440 Homologous recombination
SAMEA4384403_1062 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sste03032
]
SAMEA4384403_1062 (polA)
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_1062 (polA)
Enzymes [BR:
sste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384403_1062 (polA)
DNA replication proteins [BR:
sste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAMEA4384403_1062 (polA)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAMEA4384403_1062 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4384403_1062 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
DUF3913
Motif
Other DBs
NCBI-ProteinID:
SNV64862
UniProt:
A0A239Z1F6
LinkDB
All DBs
Position
1:1028613..1031234
Genome browser
AA seq
873 aa
AA seq
DB search
MEKLVLIDGNSLSFRAFFALPLLTNKAGVYTNAIYGFTMILDKIIKEENPTHFMVAFDAG
KTTFRNNLYSEYKGGREKTPDELRSQLPYIRQLVESYHIKHYELENYEADDIIGTLSKQA
DEQNLKTIIITGDRDLTQLASDNVTIYYTKKGVTDIDHYTPEFIAEKYDGLVPNQIIDMK
GLMGDKSDNIPGVPGIGEKTAIKLLKQFETVEGVYDNIDELKKSKMKDKLIENEADAKMS
KVLATIDRESPIEVSIDDLKLNEFDDADKIKLFKTLEFKQLLDQMDASNEGTDDRVIEYQ
DNLDGFDFENTKEASIHFETNEINYLKADVLGFAIHSQDKVYVITLDEFKENKALHAWLE
NEQVKFSAYDVKKTIILCNRMGIQIKGVAFDTMLASYILDASKTIDDVYSVVSEFGIFYV
PNDESIYGKGKKLHVPERSILFEAIAKKVTAIAETKEKMIALLKEKEQLALHDDLELPLA
TVLAEMETIGITVDKSTLVEMQENLKVRLDKLIEQIHNHAGSEFNINSPKQLGVILFEDL
KLPIIKKTKTGYSTAVDVLEQLRNEHPIIEDILVYRQLSKLQSTYIEGLQKMITPEGKIH
TRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPSKEDHVIFAADYSQIELRVLA
DITGDEHMKEAFTANEDIHTKTAMRVFNVNKDEVTSNMRRQAKAVNFGIVYGISDYGLSQ
SLSITRKEAKKFIGDYLDSFPKVKEYMDTIVQDAKQKGYVETLLHRRRYTPDITNRNFNL
RSFAERTAMNTPIQGSAADIIKLAMVQFREKMKNKDFKARLLLQVHDELIFEVPNDEIES
FKPFVEEIMNHALELSVPLSVESSYGETWYDAK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaattggtactgatagatggaaacagtttatcatttagggcattttttgcttta
cctttattaacaaataaagcgggcgtttatacaaatgcaatttatggttttacgatgatt
ttagataaaatcatcaaagaagaaaatccaacgcattttatggttgcatttgatgcaggc
aagacaacatttagaaataatttatatagcgaatataaaggtggacgtgaaaaaacacct
gatgaattaagaagtcaattaccatatattagacaattagttgaaagttatcatattaaa
cattatgaacttgaaaattatgaagctgatgatattatcggtacgctctctaaacaagct
gacgaacaaaacttaaagacgataattataacaggggaccgagatttaacgcaattagca
agtgataatgtaacgatttattacaccaaaaaaggcgtaacagatattgatcattacact
cctgaatttatagctgaaaagtatgacggacttgttccaaatcaaatcatcgatatgaaa
ggtcttatgggtgataagtcggataatattccaggtgttccaggaataggtgagaaaaca
gccataaaattattaaaacaattcgaaactgttgaaggtgtttacgataatattgatgaa
ttaaaaaaatcaaaaatgaaagacaaattaattgaaaatgaagcagatgcaaaaatgagt
aaagtgcttgcaacaattgatagagaaagtccaattgaagtaagtatagatgatttgaaa
cttaatgagtttgatgatgccgataaaattaaattgtttaaaacgttagaattcaaacaa
ttattagatcaaatggatgcaagtaatgaaggtactgatgaccgtgttattgaatatcaa
gataatcttgatggatttgattttgaaaacactaaagaagcgtctattcattttgaaacg
aatgaaattaactatttaaaagcagatgtattaggatttgctattcatagtcaagataaa
gtttatgttattactttagatgaatttaaagagaataaagcattgcatgcttggttagag
aacgagcaagtaaaattctcagcatatgatgtcaaaaagaccattattttatgtaacaga
atgggaatacaaataaagggtgtcgcatttgatacgatgcttgcaagctatatattagat
gcttctaaaacaatagatgacgtatattctgtcgtttcggagtttggcattttttatgtt
ccgaatgatgaaagtatttatggtaaaggaaagaaattgcatgttccagaacgctctata
ttatttgaagcgattgccaaaaaagttactgcaatagctgaaactaaagagaaaatgatt
gcattacttaaagaaaaagagcagctagcattgcatgatgatttagaattaccgttagcg
acagttttagcagaaatggaaacgataggtataacggttgataaatcaacgttagttgaa
atgcaagaaaacttgaaagttagacttgataaactcatagaacaaatccacaatcatgcg
ggatctgaatttaatatcaattcacctaaacaacttggagttatattatttgaagattta
aaattacctatcattaaaaaaacaaagacaggctattcaacagctgttgatgtgttagag
caattaagaaatgaacacccgattatagaggatatattagtttatagacaattgtctaaa
ctgcaatctacttatattgaaggcttacagaagatgattacacctgaaggtaaaattcat
actcgttttaatcaaacattagctcaaactggccgattaagttcagttgacccgaattta
caaaatatcccgattagattagaggaaggtcgaaaaattagaaaagcttttaaaccgagc
aaagaagatcatgtaatatttgcagctgattattcacaaattgaattacgtgtattagca
gatataacaggcgatgaacatatgaaagaagcatttactgcaaatgaagatatccatact
aagacagcaatgcgcgtgtttaacgttaacaaagatgaagttacttctaatatgagacga
caagctaaggcagttaactttgggatagtatatggtattagtgactatggtttaagtcaa
agtttaagtataactcgaaaagaagctaaaaaattcataggtgattatttagatagtttc
cctaaagtgaaagaatatatggatacaattgttcaagatgctaaacaaaaaggatatgtc
gaaacattactgcatagaagaagatatacgcctgatattacgaatcgtaatttcaattta
agaagttttgctgaaagaactgcaatgaatacaccaattcaaggtagtgcagcagatatt
atcaaattagcgatggttcagtttagagaaaaaatgaaaaataaagatttcaaagctaga
ttgttgctacaagtacacgatgaattaatctttgaagtgccaaatgatgaaatagaaagc
tttaaacctttcgtagaagaaattatgaatcatgctcttgagctatcagtaccactaagt
gttgaatccagctatggtgaaacttggtatgatgctaaataa
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