Mammaliicoccus stepanovicii: SAMEA4384403_1124
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Entry
SAMEA4384403_1124 CDS
T06999
Symbol
recJ
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03410
Base excision repair
sste03430
Mismatch repair
sste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4384403_1124 (recJ)
03430 Mismatch repair
SAMEA4384403_1124 (recJ)
03440 Homologous recombination
SAMEA4384403_1124 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_1124 (recJ)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAMEA4384403_1124 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA4384403_1124 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAMEA4384403_1124 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
SNV65450
UniProt:
A0A239Z3A3
LinkDB
All DBs
Position
1:1088630..1090924
Genome browser
AA seq
764 aa
AA seq
DB search
MTKARYQWSVSEQSNEIDKKVIKKFNISPLLEKTLISKGYTSEEDIEHLLSKEVLYHDEM
LLSDMEKSVTRIHKAIQNNEKILVYGDYDADGVTSTAILVKTLESLNAIVGWYIPNRFTE
GYGPSEGAFRNAHDEGVTLIITVDNGIQGHHEIDIANELGIDVIVTDHHEFGKTTPNAYA
IVHPMHPEFEYPFKYLAGVGVSYKLCKALKQDLPKSFLGLVAIGTIADLVSLTDENRSMV
KQGLQVLNESPSPGVKALLEIADYKDEVNEQTVGFIIGPRLNAVGRLDDARLALELLMVD
DYEEATFLAEEVDHFNLERKEIVEAITEEAMILADEQVKESSQFLVLAKENWNEGVLGIV
ASRIVENYNLPTIVLNVDINQNHAKGSARSIEQVSMYEFLQNHSELITKFGGHHMAAGMT
MEIDAIEPLKKALNDDMKNLTDGKPLLPQLTIDAEITMSDISVDNIFDLERLKPFGTDIT
APIFSIKNSQIKSVKGIGQNEKHLKLTLTEKNINALHWNFGHLMNDISEETTINLAGSLN
VNEWNGHQSPQIILKDLELSNDHSIFDYRSKNKQELLKINQEDAIFVINKNEEKVNENYI
YYGETYNKEVASCILRDLPDDLESFKHTINEVNADKYYLVFKGQSNSYFDGIPNDQTFKS
VYKALLNKKETNIQTEGMQLCQFLKIKPDQLKFILNCFYELNFITINNGIITVNKEAPKN
DIKNAPLYQAKQQQIEIEKTLLYNDSSSLVSWIQSLISNNEEEI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcacgttatcaatggtctgtttcggaacaaagtaatgaaatagataaaaag
gtaattaaaaaatttaatatttccccacttttagagaaaactttaatttctaaaggatat
acctctgaagaagatatagagcatttactatcaaaagaagtattgtatcacgatgaaatg
ttactaagtgatatggaaaaatcagtcacaagaatacataaagccattcaaaataatgaa
aaaatactagtatatggagactatgatgctgatggtgtaacctcaactgcgattttagtt
aaaacgttagagtcactaaatgcaattgttggttggtatattccaaatagatttacagaa
ggatacggaccgagcgaaggagcatttagaaatgcgcatgatgagggtgttacattaatt
attacagtagataatggcattcaaggtcaccacgaaatagatattgcgaatgaattaggt
atagatgttatcgttacagatcatcatgaatttggtaaaacaacgcctaatgcatatgct
atcgttcatccgatgcatccagaatttgaatatccgtttaaatatttagccggtgttggt
gtgtcttataaattatgtaaagcacttaaacaagatttgcctaaatcatttctaggatta
gtagccatcggtacgattgcagatttagtaagtttaactgatgagaatagatctatggtt
aaacaaggcttacaagtacttaatgagtcaccttcaccaggtgttaaagcattgttagaa
attgctgattataaagatgaagtcaatgaacaaactgtaggctttattatcggtccacga
ttgaatgcggttggtcgcttagatgacgcgagattagcattagaattgttaatggtcgat
gattatgaagaagctacatttttagctgaagaagtagatcatttcaatttagaaagaaaa
gaaattgtagaagccataacagaagaagcgatgattctcgcagatgaacaagttaaagaa
tcttctcaatttctagtattagcaaaagaaaattggaatgaaggtgtgttaggtattgtt
gcatctagaattgttgaaaattataatttgccgacaattgttttgaatgtagacattaac
caaaatcatgcaaaaggttccgcacgtagcatagaacaagtttctatgtatgaattctta
caaaatcattcagaactgattacgaaatttggtggtcatcatatggctgcaggtatgacg
atggagattgatgcaattgagccattgaaaaaagcattgaatgatgacatgaaaaattta
actgatgggaaaccattattacctcaattgacgatagatgctgaaattacaatgtcagat
atttctgttgataatatctttgatttagaaagattaaaaccattcggtactgatatcact
gcacctatattttcaattaaaaattcacaaattaaatctgttaaaggtataggacaaaat
gaaaaacatctcaaattaactttaactgagaagaatataaatgcgttacattggaatttt
ggtcatttaatgaatgatatttctgaagaaacgactataaatttagcaggaagtctaaat
gttaatgaatggaacggccatcaatcaccacaaattattctgaaagatttagaactcagt
aatgaccattcaatttttgattatagaagtaaaaacaaacaagaattattaaagataaat
caagaagatgcgatttttgttattaataagaatgaagaaaaagtaaacgaaaattatatt
tattatggtgagacatataataaagaagttgcgtcgtgcatattgagagatttaccagat
gacttagaatcatttaagcatacaataaacgaagtgaatgctgataaatattatttagta
tttaaaggacaatcaaattcttattttgatggtattcctaatgatcaaacttttaagtca
gtttataaagcattattaaataagaaagaaacgaatattcaaactgaaggtatgcaactt
tgtcaatttttaaaaatcaaacctgaccagttgaaatttattttgaattgcttctatgag
ttgaactttattacaataaataatggtataattactgtgaataaagaagcaccaaaaaat
gatataaagaacgcaccattatatcaagcaaaacaacaacaaatcgaaatagaaaaaaca
ttattatacaatgatagctcatccttagtttcatggattcaatcattgataagtaacaat
gaggaggaaatataa
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