Mammaliicoccus stepanovicii: SAMEA4384403_1561
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Entry
SAMEA4384403_1561 CDS
T06999
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sste
Mammaliicoccus stepanovicii
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sste03032
]
SAMEA4384403_1561 (topA)
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_1561 (topA)
Enzymes [BR:
sste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMEA4384403_1561 (topA)
DNA replication proteins [BR:
sste03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4384403_1561 (topA)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA4384403_1561 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
DUF2996
Toprim_4
Toprim_2
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
SNV70538
UniProt:
A0A239ZIH9
LinkDB
All DBs
Position
1:complement(1525064..1527136)
Genome browser
AA seq
690 aa
AA seq
DB search
MAENLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVENNYEPRYITIRGK
GPVVKDLKRYAKKAKNVYLASDPDREGEAIAWHLAHILDIDENKKSRVVFNEITKDAVKE
SFKNPREIEHELVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EINAFKPEEYWTIEGLFKHQSKTFTAKFLHEKSKAVKLKNEGDVQKITSKLDGDKFEVTK
VTKKEKLRHPAKSFTTSSLQQEASRKLNFKARKTMMLAQQLYEGIDLKRQGTVGLITYMR
TDSTRISDSAKSEAASFIETHYGKEYLTKAKQAKGKQGAQDAHEAVRPTSVSRTPDQMKS
YLSRDQYRLYKLIWERFMASQMAPAIADTVAADITQGDLKFRANGQTIKFKGFMKVYVEA
KDDQDEEKEGKLPPLKEGDIVTAEKIDPKQHFTQPPPRYTEARLVKTLEELRIGRPSTYA
PTIDTIQKRNYVKLDQKRFVPTELGEIVHESVKEYFPEIIDVDFTVNMETLLDKVADGEI
EWKKVIDMFYENFKIDVARAEEEMEKIEIKDEPAGEDCELCGSPMVYKMGRYGKFMACSN
FPDCRNTKAIIKTIGVKCPKCKEGEVVERKSKKNRIFYGCSRYPECDYTSWDKPLDRPCP
KCETILVERKKGKSAQVICPNCDYKEQEQK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaatcttgtcattgttgaatcgcctgcaaaagcaaaaaccatagaaaaatat
ttaggaaaaaagtataaggtcatagcatctatggggcatgttagagatttgccacgtagt
caaatgggtgtagatgttgaaaataactatgaacctagatatataactattcgaggaaaa
ggaccagtcgtaaaagatttaaaacgttatgcaaaaaaagcaaaaaacgtttatctcgca
agtgaccctgaccgcgaaggtgaagctattgcttggcatttagcgcatatattagatata
gatgaaaacaaaaaatcaagagttgtatttaacgaaataacgaaagatgcagtgaaagaa
agtttcaagaacccaagagaaatagaacatgaattagttgatgcccaacaggcacgtcgt
attttggatagacttgttggatataatatttctccagttttatggaaaaaagttaaaaaa
ggtctttctgcaggtcgagttcaatcagtagcattaagattggtcattgatcgtgagaat
gaaataaatgcttttaaacctgaagagtattggactattgaaggattgtttaaacaccaa
tcaaaaacgtttactgcgaaatttttacatgaaaaaagcaaagcagttaagttgaaaaat
gaaggtgacgttcaaaagataacgtcaaaacttgatggggataaatttgaagttacaaaa
gtaactaagaaagaaaagttaagacatcccgctaaatcatttacaacttcttcattacaa
caagaagcttctcgtaaattgaattttaaagctagaaaaacaatgatgttagctcaacaa
ttatatgaaggtattgatttaaaacgacaaggaacagttggtttaatcacgtatatgaga
actgattcaacacgtatttcagatagtgctaaatcagaagcagcatcatttattgaaacg
cattacggtaaagaatatcttacgaaagctaaacaagctaaaggtaaacaaggtgcacaa
gatgcccatgaagcggttagaccgacaagtgtatcgcgtacaccagaccaaatgaaatca
tatttatcacgcgatcaatatagattatataaacttatttgggaacgatttatggcaagt
caaatggcaccagccattgcagatactgtggcggctgacattactcaaggtgaccttaaa
tttagagcgaatggacaaacaattaaatttaaaggttttatgaaagtttatgttgaagcc
aaagatgaccaagacgaagaaaaagaaggaaaattgcctccattaaaagaaggcgatatt
gttacagcagagaaaatcgatccaaaacaacactttactcagccaccaccacgatatact
gaagctagactagttaaaacgttagaagaacttagaattggtagaccatcaacatatgca
ccaacgattgatactatccaaaagagaaactacgtgaaattagatcaaaaacgctttgtt
ccaactgaattaggtgaaattgtacatgagtcagtaaaagaatacttccctgaaattatt
gatgtcgattttactgtaaatatggaaacgttgttagacaaagtagctgatggtgagatt
gaatggaagaaagtaatagatatgttctatgaaaacttcaagatcgatgttgctagagcg
gaagaagaaatggaaaaaatcgaaatcaaagatgaaccggctggggaagattgtgaacta
tgtggttcgcctatggtatacaaaatgggacgctatggtaaatttatggcatgttcaaac
ttcccagattgtcgaaacacgaaagcaatcatcaagacaatcggtgttaagtgtccgaaa
tgtaaagaaggagaagtagttgaacgtaaatctaagaaaaatagaattttctacggctgc
tctagatacccagaatgtgattacacttcatgggataaaccacttgatcgtccttgtcca
aaatgtgaaacaatactagttgaacgtaaaaaaggaaaatcagcgcaggttatttgtcct
aactgtgattataaagagcaagaacaaaaataa
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