Mammaliicoccus stepanovicii: SAMEA4384403_2095
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Entry
SAMEA4384403_2095 CDS
T06999
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4384403_2095 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sste03019
]
SAMEA4384403_2095 (recQ_2)
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_2095 (recQ_2)
Enzymes [BR:
sste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384403_2095 (recQ_2)
Messenger RNA biogenesis [BR:
sste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4384403_2095 (recQ_2)
DNA repair and recombination proteins [BR:
sste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4384403_2095 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Receptor_IA-2
Motif
Other DBs
NCBI-ProteinID:
SNV76870
UniProt:
A0A240A147
LinkDB
All DBs
Position
1:complement(2049713..2051491)
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AA seq
592 aa
AA seq
DB search
MQNILQEYFGYQQFRAGQKDIIDKVIDHRPTLGVMPTGGGKSVCYQVPGLYLDGLTIVIS
PLISLMKDQVDSLRSMGINAEFLNSTLTSKEKKRVESELVSGNLKFLYIAPERFNQPQFI
QMINKCNVQLIAFDEAHCISKWGHDFRPSYQEVISHVMSLPHHFRLVALTATATKEVQED
ISSKLGIAPNDIVETSIKRENLTFKVDNTYQRLNFVKDYVKQHRNQSGIIYCSTRKQVEQ
LSETFDDLEIDNVMYHAGLPKEERANAQRKFIDDDVKLAVATNAFGMGIDKSNVRFVIHY
NMPQDIESYYQEAGRAGRDQLDSECILLYSDRDIDLQKFFISSSPADDEYKEKQGEKLRQ
MIQYTKTTKCLEAMMIHYFNPDEKLEECGRCSSCVQAEKNYNMTTEAQKILSCIARLKQN
EKRNMIIQVLRGEETNQISNLGYNELSTYGILKNYTTNECHHLLDELRYKGYLNEHKEIL
SVDQSAMDVLRGNVEIMTTPFRTKPTEIVDIQTITDVDRSLFNRLVEVRKNLSKELEVSP
LSIFSDQILEQFAKRLPDSKKEMVLIDGIGSYKLKHYCPIFIDTIKTYKQPI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacattttacaagaatatttcggataccagcaatttagagctggacaaaaagac
ataatcgataaagtgattgatcaccgaccaacattgggcgtaatgccaactggtggaggt
aaatcggtatgttaccaagtaccaggcttatatttagatggattaacaattgtgattagt
ccattgatatcactaatgaaagaccaagttgacagtttaaggtcaatggggattaatgct
gaatttttaaatagtacgttaacaagtaaagaaaagaaaagagttgaaagcgaactcgtt
tcaggaaacttaaaattcctttatattgcaccagaacgatttaaccaacctcaatttata
caaatgataaacaagtgtaatgtacaattaatagcatttgatgaagcgcattgtatttca
aagtgggggcatgattttagaccaagttatcaagaagttatctcacatgttatgagctta
ccgcatcactttagactggttgcattaactgcaactgcaactaaagaagttcaagaagat
atatcaagtaaactaggaatagcaccaaatgatattgttgaaacctcaattaagcgtgaa
aatttaactttcaaagtagataacacatatcaacggttaaattttgtgaaagattacgtt
aaacaacatcgtaatcaatcgggtattatttattgttcaacacgaaagcaagttgaacaa
ttaagtgaaacatttgatgatttagaaattgataacgttatgtatcacgctggtcttcct
aaagaagaaagagcaaatgctcaaagaaaatttatagatgatgacgttaaattggctgtt
gcaacgaatgcatttggaatgggtatcgacaaatctaatgttcgatttgttattcattat
aatatgcctcaagatatcgaatcatattatcaagaagcaggtagagcaggacgtgatcag
ctagatagtgaatgtatattattatactccgaccgagatattgatcttcaaaaattcttt
atttcttctagtcctgctgatgatgagtacaaagaaaagcaaggcgaaaagctaagacag
atgattcaatatacgaaaacaacgaaatgccttgaagctatgatgatacattactttaat
ccagatgaaaaactagaagaatgtggcagatgttcaagctgtgttcaagctgaaaaaaat
tacaatatgaccacagaagctcagaaaatattaagttgtattgcacgtctaaaacaaaac
gaaaaacgaaatatgattattcaagttctaagaggagaagagacaaatcaaatttctaac
ttaggatataatgaattgagtacgtatggtattttgaagaattatacgacgaatgaatgt
catcatctattagatgaattaagatataaaggatatttaaatgaacataaagaaatttta
agtgtcgatcaaagtgctatggatgtattaagaggtaatgttgaaattatgacaacacca
tttagaacgaaacctacagaaattgtggatatacaaacaattacagatgttgatcgatcg
ctatttaatcgtttggtagaagtgcggaaaaatttaagcaaagaattagaagtctcacca
ctttctatattttcagatcaaattctggaacaatttgcgaaaagattaccagattctaaa
aaagaaatggttctaatagatggaatcggtagttataagttaaaacattattgtcctatt
tttatcgacactattaaaacatataagcaacctatctaa
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