Mammaliicoccus stepanovicii: SAMEA4384403_2260
Help
Entry
SAMEA4384403_2260 CDS
T06999
Symbol
licR_4
Name
(GenBank) transcriptional antiterminator
KO
K03483
mannitol operon transcriptional activator
Organism
sste
Mammaliicoccus stepanovicii
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sste03000
]
SAMEA4384403_2260 (licR_4)
Transcription factors [BR:
sste03000
]
Prokaryotic type
Other transcription factors
BglG family
SAMEA4384403_2260 (licR_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
Mga
HTH_11
PTS_EIIA_2
PTS_IIB
HTH_24
HTH_DeoR
Sigma70_r4
HTH_23
HTH_10
HTH_Crp_2
GerE
HTH_AraC
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_38
MarR_2
Sigma70_ECF
Xre-like-HTH
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
SNV79085
UniProt:
A0A240A6R7
LinkDB
All DBs
Position
1:2215789..2217831
Genome browser
AA seq
680 aa
AA seq
DB search
MMISNREKSILKLLSERLHSFLTIHDIAQTLGISSRTVHREMKRVEETLKTYHLSLSRVP
KLGIRIEGTPEDIDGFVQRLNEQHTIDLSDEERKVIILYNLIQSKDPVKLYSLANEIGAS
THTLNKIIEHLTPELELFDLSLERKRGEGLILIGDEVDKRQLLARIMLEKLDSDSVYSVV
EDHFVYHTLNETHLQGIVDIDRLFNVERLLMDELGSLPYTLTEASYLTLTIHIVLAIERI
KHDGHVEIEDDILQDLITTDEYTVSERLTNLLSNIYDVTFNASEIAFITMHLRGARRRHE
TSHENNELDGQRVNELIQYVKSQGFIFKDETSLFNGLSSHLEPALNRIEANIETYNPLTE
MIESYDEQLFNAVSSGLKIVLSDYHFPKSEVAYIALHFGGMVEAKAQHSLNILVVCSSGI
GTSRILSNRLKQNFPEITQTTEVSVSDLKTIDIKKYDGMISTVAVDTQYPHITVNPLLPT
HDAESVRYFLKLQQTNVTKPSSTQGEDYTLSYDDYDHVMTFIKDSTALIQNIIVEKKKVT
NLNRYLIQTLTKHDVIERSNEFSEKLEQRITLQGFALTGYPIAIPHLSDELIKKPQLIIT
ELTKPLTLTTLENKQQEVNWLVSMFIPMNSEQGQLMSEVSSLITEHLDDISQLLNDQVLI
ENTLKSFFLNKLKQKLTKME
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagtaacagggaaaaaagtattctcaaattactatctgagcgccttcactct
tttttaacgattcatgacatcgcacaaacacttggaatttcttcaagaactgttcataga
gagatgaaacgcgttgaggaaacacttaagacttatcatctttcgttatcaagagtgcct
aaattaggtataagaatcgaaggtacacccgaagatatcgatggttttgtacaaagatta
aatgaacaacatactattgatttatctgacgaagaacgaaaagttattattttatacaac
ttaattcaatcaaaagatccagtaaaactgtatagtctcgctaatgaaattggtgcgtca
acgcatactttaaataaaataattgaacacttaacacctgaacttgaactgttcgattta
tcactagaaagaaaacgtggtgaaggattaattttaattggtgatgaagttgataaacga
caacttctcgcgagaattatgcttgaaaaacttgatagcgatagcgtttattctgtagtt
gaagatcatttcgtatatcacacattaaatgaaacgcatttacaaggaattgtagatata
gatagattgtttaacgtcgaacgtttattaatggatgagttaggttcacttccatacaca
ttaaccgaagcgagttatttaactttaaccatccatatcgtattagcaattgagcgaatt
aaacacgatggtcatgttgaaattgaagatgatatattacaagacctcattacgacagat
gaatacactgtttcagaaagactaacaaatctactgagtaatatttatgacgttacattt
aatgcatcagaaattgcatttattacgatgcatttaagaggtgctagaagacgtcatgaa
acatcacatgaaaataatgaattagatggacaacgtgttaatgaacttattcaatacgta
aaatctcaagggtttattttcaaagatgaaacatctttgtttaacggtttaagttcacat
ttagaacctgctttaaatagaatagaggctaacattgagacctacaatccgcttaccgaa
atgatagaaagttatgatgaacaactatttaatgccgtttcatcaggtctaaagattgta
ctcagtgattatcattttcctaaaagtgaagttgcatatatcgcattacattttggaggt
atggtagaagctaaagcacaacattctctaaatatcttagtagtttgcagtagtggcatt
ggaacaagtcgtatcctttcgaaccgtctgaaacagaactttcctgaaatcacacaaact
actgaagtttcggttagtgatttaaagacaattgacatcaagaagtatgacggcatgatt
tcaacagttgcagtggatacccagtatcctcatattactgtcaatcctttgttacctaca
cacgatgcagaaagtgttagatattttttaaagttacagcaaacaaatgttacaaaaccg
agttctactcaaggggaagattataccctttcttatgatgattatgatcatgtcatgaca
ttcattaaagatagtaccgcactaattcaaaacatcattgtagaaaagaaaaaagtaacg
aaccttaatcgttacttaattcaaacattaacaaaacatgatgttatcgaacgatcaaat
gaatttagtgaaaaacttgaacaaagaataacacttcaaggttttgcattaacaggttat
ccgattgcgatacctcatttatcagatgagcttattaagaaaccgcaactgattataact
gaattaactaaacctttaacactaacgacattagagaataaacagcaagaggtaaattgg
ctcgtctcaatgttcatacctatgaactctgaacaaggtcaacttatgagtgaagtatca
tcattaataacagaacatttggatgatataagtcagttgttaaatgatcaagtgttgatt
gaaaacacacttaaatcatttttcttaaataaattaaaacaaaaattaacgaaaatggag
tga
DBGET
integrated database retrieval system
