KEGG   Sagittula stellata: ABFK29_04950
Entry
ABFK29_04950      CDS       T10517                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sstl  Sagittula stellata
Brite
KEGG Orthology (KO) [BR:sstl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sstl03400]
    ABFK29_04950
Enzymes [BR:sstl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ABFK29_04950
    5.6.2.6  RNA 3'-5' helicase
     ABFK29_04950
DNA repair and recombination proteins [BR:sstl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ABFK29_04950
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: XAY80001
LinkDB
Position
complement(1044039..1046477)
AA seq 812 aa
MTLPTPLRDWFHARGWQVHPHQQAMLDRAASPSLLLIAPTGGGKTLAGFLPTLSGLTEKP
RDGLHTLYISPLKALAADIRRNLLVPIEEAGLPIRVEDRTGDTSYTRKRRQRADPPHILL
TTPESLALLTSYEDAARTFAGIERIIIDEIHALAESKRGDQLMLALARLQTLAPNLRRVG
LSATVEDPDAIARLMSFGDTTTEILHADPGPDPDIRMLRTEETPPWAGGGAAYAIPAVLE
QVKQHKTTLIFHNTRAQAEIFFHNLWLANEDGLPIGIHHGSLDRGQREKVEAAMVAGKLR
AIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEIV
ECVAALEAVKAHDLDGEPRGPGPRDVLCQHILIAAASGPFDADALYAEMSAAGPYRGLSR
AQFDACLDFCATGGYALRAYDQWKRLQLRPDGLWQLRDPRSATRIRQNVGTIQDTDTLKV
RWKGRGGAPLGEIEEGFAASLTKGDTFLIGGQIVRYEGLRELTVEVTRDAHKKPKIATFM
GTKFATSTQLSERILRLFQQETWPELPDHTAQWLALQRERSRLPEPGRLLVESFPHDGRE
QFVAYGFAGRNAMQTLGLLLTKRMEEMGLAPMGFVATDYATLIWGLDSVADPAPLFDVAA
LEAGLDGWLAGNAVMKRTFRTSATIAGLIERQLGGQRKTGRQATMSSDILYDTLLKYDPD
HLLMQITREEAMRGLVDFSRIREMCARVGNRIDHMQLDRVTPLAAPLFLEPGRVPVNGSA
DQRLLEEEVTRLMSESGLSEVEVTKKTWRVPF
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgacgcttcctactcccctccgggactggttccacgcgcgcggctggcaggttcacccg
caccagcaggccatgctggaccgggccgcctccccctcgctgctgctgatcgctccgacc
ggtggcggcaagacgctggcgggtttcctgccgaccctttctggactgacggaaaagccg
cgcgacgggctgcacacactctacatctcgccgctgaaggcgctggccgccgacataaga
cgcaacctgttggtccccatcgaagaggcgggcctgccgatccgggtggaggaccgcacc
ggcgacacctcttacacccgcaagcgacgccaacgcgccgatccgccgcacatcctgctg
accactccggaatccctggcactgctgacgtcctatgaagacgccgcacgcactttcgcc
gggatcgaacggatcatcatcgacgagatccacgcactggcggaatcgaaacgcggcgac
cagttgatgctggcactggcgcgcttgcaaaccttggcaccgaacctgcgccgcgtgggc
ctgtcggccacggtggaggacccggacgctatcgcgcggctgatgtcgttcggcgataca
acgacagagatcctgcatgccgaccccggacccgatccggacatccggatgctgcggacc
gaagagaccccgccatgggctggcggcggtgccgcctatgccattcccgccgtgctggag
caggtgaagcagcacaagaccacgctcatcttccataacacccgcgcacaggccgagatc
ttctttcacaatctgtggctcgcgaacgaggacgggttgccgataggcatccaccacggc
tcgctggaccgaggccagcgcgaaaaggtcgaggccgcaatggtcgccggcaaattgcgc
gccatcgtctgcaccggctcgctcgacctcgggatcgactggggcgacgtggacctcgtg
atccaagtgggcgcgccgaagaacgtcaagcggctggtacagcggatcgggcgcgcgaac
caccgctacaacgccccgtcgaaggcgctgctggtgcccgccaaccggttcgagatcgtc
gaatgcgtagccgcgctcgaggcggtgaaggcgcatgacctcgacggagagccacgcggc
cccggcccgcgcgacgtgctctgtcagcacattctgatcgccgccgcctccggtccgttc
gacgccgacgcgctctatgccgagatgtccgccgccggtccctatcgggggctgagccgc
gcgcagttcgatgcctgcctcgatttctgtgccacgggcggctatgcgctgcgtgcctac
gaccagtggaagcgcctgcaactgaggccagacggcctgtggcagttgcgcgacccgcgc
tcggccacgcgcatccggcagaacgtcggcacgatccaagacaccgacacgctgaaggtc
cgctggaaagggcgtggcggcgcaccgctgggcgagatcgaggagggctttgccgcctcg
ctgacgaagggcgacaccttcctgatcggcgggcagatcgtgcgctatgaaggtctgcgg
gaactgaccgtcgaagtcacacgcgacgcgcacaagaaaccgaagatcgccaccttcatg
ggcacgaagttcgccacctccacgcagctttcggaacgcatccttcgacttttccagcag
gagacatggccggagctgcccgaccacaccgcgcaatggctggcccttcagcgcgaacgg
tcccgtctgcccgaacccgggcgcctgctggtcgaaagcttcccgcacgatggacgcgaa
cagttcgtggcctacggctttgccgggaggaacgcgatgcagacgctggggcttttgctg
accaagcggatggaggaaatgggcctcgcgccgatggggttcgttgcgacggactatgcc
acactcatatgggggctggacagcgtggccgacccggcaccgctgttcgacgtcgcggcg
ctggaggcgggcctcgacggctggctggcgggcaacgcggtgatgaaaaggaccttccgc
acctctgccaccatcgccgggctgatcgaacggcagcttggcggtcaacgcaagaccggg
cggcaggcaaccatgtcgtctgatatcctttacgatacgctgctcaaatacgaccccgac
cacctgctgatgcagatcacccgcgaagaggcgatgcgcggactcgtcgatttttcccgc
atccgcgagatgtgcgcccgtgtgggcaaccgcatcgaccacatgcagttggatcgcgtg
acgccgctggccgcgccgctgttccttgaacccgggcgcgtgccggtgaacggttcagcc
gaccagcgcttgctggaagaagaggtcacgcgcctgatgtccgaaagcggcctgtccgaa
gtggaggtcaccaagaagacatggcgcgttccgttctga

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