Sagittula stellata: ABFK29_05080
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Entry
ABFK29_05080 CDS
T10517
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sstl Sagittula stellata
Pathway
sstl03030
DNA replication
sstl03430
Mismatch repair
sstl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sstl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFK29_05080 (dnaE)
03430 Mismatch repair
ABFK29_05080 (dnaE)
03440 Homologous recombination
ABFK29_05080 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstl03032
]
ABFK29_05080 (dnaE)
03400 DNA repair and recombination proteins [BR:
sstl03400
]
ABFK29_05080 (dnaE)
Enzymes [BR:
sstl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFK29_05080 (dnaE)
DNA replication proteins [BR:
sstl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFK29_05080 (dnaE)
DNA repair and recombination proteins [BR:
sstl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFK29_05080 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XAY80027
LinkDB
All DBs
Position
1074753..1078253
Genome browser
AA seq
1166 aa
AA seq
DB search
MSDPRFIHLRTHTEYSLLEGALRLKKLPGLCADMGMPAVAVTDTNNLFAALEFSVGASGA
GVQPIIGCQIDLRYFEQAPGERIKPPAPVVLLAQTERGYEHLMKLNSCLYLRRDNELAHV
TLDELEAHSEDVICLSGGPDGPVGRLLRTNSRAAAQTLMTRLHAIFEDRLYVELQRHPGE
DGTPPEAEHLTERGFVEMAYEMGLPLVATNDVYFPKSSMYEAHDAMICIAEGAYVDQQEP
RRRLTPQHYLKTPQEMAVLFADLPEALENTVEIAKRCAFMAYRRDPILPRFADDEVTELR
RMANEGLQARLAVIPHAVSVEDYQKRLDFELGIIEGMGFPGYFLIVADFIQWAKDQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QDKYGHDRVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALR
DEPRLAEEAKNEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIADRPTDELVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFKSGRPLHVAADGTQLYEPPEGAE
NQINLIPLDDKVTYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREITSVHPSIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEQGAAKNGVEKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLGLPWVPPCVNRSLATFDVVEGQ
LVYALGALKNVGLEAMKLVVEGRDGRAFSTVFDFARRVDLKKIGKRPLEMMARAGCFDVL
DPNRRRIFDSLDALVAYSAAIHEQKGSAQVSLFGEAGDDLPEPRLSPVSDWLPAERLAEE
FKAVGFYLSGHPLDDYMPALKRQDVVTLDEVMAKAERGPLVAKLAGVVAGRQERKSARGN
RFAFAQLSDPTGAYEVTLFSETLEKSREHLETGSKVVVTVEATMESDQLKLLGRAVMPVD
AAAAQGGPSGMRIFVDTEMALSQIASVLGRAAEQLPKAPRAPIVLRLAAPGLPGEVEMDL
SERFPVTPEIKGAVKSLDGVLAVEDF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccgcgattcatccacctccgcacccacaccgaatattccctgctcgaaggc
gcgctccggctgaagaagctgccggggctgtgtgccgacatggggatgcccgccgtggcg
gtcaccgacaccaacaacctgttcgcggcgctggaattttccgtgggcgcgagcggtgcg
ggtgtgcagccgatcatcggctgccagatcgacctgcgctatttcgagcaggccccgggc
gagcggatcaagccaccggcgccggtggttctgctggcccagacggagcgcggctacgag
cacctgatgaagctcaactcctgcctctatctgcgccgcgacaacgagctggcgcatgtc
acgctggacgagctggaggcgcattcggaggacgtgatctgcctgtcgggcggaccggac
gggccggtgggacggctgctgcgcaccaattcgcgcgcggccgcgcagacgctgatgacc
cggttgcacgcgatcttcgaggaccggctgtacgtcgagttgcagcgccatccgggcgag
gacggaacgccccccgaggcggagcacctgacggagcgcggctttgtcgagatggcctac
gagatgggcctgccgctggtggcgacgaacgacgtctatttccccaaatcctccatgtac
gaagcgcatgacgcgatgatctgtatcgcggaaggcgcctatgtcgatcagcaggagccg
cgccgccgcctgacgccgcagcactacctgaagaccccgcaggagatggcggtgctgttc
gcggatctgccggaggcgctggagaacaccgtcgagatcgcgaaacgctgcgccttcatg
gcctaccgccgcgacccgatcctgccgcgctttgccgacgacgaggtgacggaactgcgc
cgcatggcgaacgaggggcttcaggcccggcttgccgtgatcccgcacgccgtgtcggtg
gaggactaccagaagcggctggatttcgagctggggatcatcgaggggatgggcttcccc
ggctacttcctgatcgttgcggacttcatccagtgggcgaaggaccaggacatcccggtt
ggcccggggcgggggtcgggcgcggggtcgctggtggcctatgcgctgaccatcaccgac
ctcgacccgctgcgctattcgttgctgttcgaacgcttcctgaatccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgcatggaccgccgcgaagaggtgatccgctacgtg
caggacaagtatggccacgaccgcgtgggccagatcatcaccttcggcgctctgttgtcg
aaggcggcggtgcgcgacatgggccgcgtgttgcagatgccttacgggcaggtggaccgg
ctgtcgaagatgatcccggtggaaggcgtcaaaccggtcagcatcgaacaggcgctgcgc
gacgagccgcggcttgccgaagaagcgaagaacgaggaggtcgtcgaccggctgctgaag
tacggcatgcaggtggaggggctgctgcgctcggcgggcacgcacgcggcgggcgtggtc
atcgccgaccgtcccacggacgagctggtgccgctgtatcgcgacccgcgctctgacatg
ccggccacgcagttcaacatgaagtgggtggagcaggccggtctggtgaagttcgatttc
ctcggcctgaagacgctgacggtgatccagaacgccatggacctgatcttcaagtccggg
cgcccgctgcatgtcgccgccgacggcacgcagctttacgagccgcccgagggcgcggag
aaccagatcaacctgatcccgctggacgacaaggtcacctacaagctttacgcctcggcc
aagacggtggcggtgttccaggtggaaagctcgggcatgatggatgcgctcaagcgcatg
aagcccacctgcatcgaggacatcgtggcgctcgtggcgctctaccgtcccggcccgatg
gagaacatcccggtttactgcgaggtgaagaacggcctgcgcgagatcacctcggtgcat
ccgtccatcgaccacatcctggcggagacgcagggcatcatcgtctaccaggagcaggtg
atgcagatcgcacaggtcatggcgggctactcgcttggcggcgccgacctgctgcgccgc
gcgatgggcaagaagatcaaggaggcgatggacgccgaacggccgaagttcgaacagggc
gcggcgaagaacggggtggagaagaagaaggccaccgaggtcttcgaccttctggagaaa
ttcgccaactacggcttcaacaagtcgcacgcggcggcctacgcggtggtcagctaccag
accgcatggctgaaggcgaaccacccggtggagttcatggcaggcgtcatgaactgcgat
atccacctcaccgacaagctggccgtctatttcgaggaggtccgcaaggggctggggctg
ccttgggtgccgccctgcgtgaaccgctcgctcgccaccttcgacgtggtggagggccag
cttgtctatgccctgggggcgctgaagaacgtcggactggaggcgatgaagctggtggtc
gaggggcgcgacgggcgcgcgttttctaccgtgttcgactttgcccgccgcgtggacctg
aagaagatcggcaagcggccgctggagatgatggcgcgggcgggctgtttcgacgtgctc
gacccgaaccggcggcgcatcttcgattcgctcgacgcgctggtggcctattcggcggcg
atccacgaacagaagggatcggcgcaggtgtcgctgttcggcgaggcgggcgacgacctg
ccggagccgcgcctgtcgcccgtgtcggactggctgcccgccgaacgtctggcggaagag
ttcaaggccgtgggtttctacctgtccggtcacccgctcgacgactacatgcccgcgctg
aaacggcaggacgtggtgacgctggacgaggtcatggccaaggccgaacgcggtccgctc
gtggcgaagctggcgggtgtcgtcgccggacggcaggagcggaagtcggcgcgcggcaac
cgtttcgcctttgcgcagttgtcggaccccaccggcgcctacgaggtcacgctgttctcc
gagaccttggagaaatcgcgcgaacatctggagaccggatcgaaggtcgtcgtcaccgtc
gaagcgacgatggagagcgaccagctcaagctgctggggcgcgcggtgatgccggtggat
gcggcggcggcgcagggcgggccttcgggcatgcggatcttcgtcgacacggagatggcg
ctgtcccagatcgccagcgtgctgggccgtgccgccgagcagttgccgaaggcgccgcgt
gcgccgatcgtcctgcggctggcggcgccgggcctgccgggcgaagtggagatggacctg
tccgaacgctttcccgtcacgccggagatcaagggcgcggtgaagtcgctcgacggcgtt
ctggcggtcgaagacttctga
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