Sagittula stellata: ABFK29_05950
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Entry
ABFK29_05950 CDS
T10517
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sstl Sagittula stellata
Brite
KEGG Orthology (KO) [BR:
sstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstl03016
]
ABFK29_05950 (truB)
Enzymes [BR:
sstl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABFK29_05950 (truB)
Transfer RNA biogenesis [BR:
sstl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABFK29_05950 (truB)
Prokaryotic type
ABFK29_05950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XAY80195
LinkDB
All DBs
Position
complement(1253536..1254453)
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AA seq
305 aa
AA seq
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MARKRKGRDISGWLIVDKPAGMTSTAVVNKVRWALEAKKAGHAGTLDPEATGLLAVALGE
ATKTVPYITDATKAYAFTIRLGQATNTDDTEGEITAQSDLRPTDDEIKEALHGFVGEIMQ
VPPQFSAVKIDGERAYKRARDGEEMDIAARRLWVEELVLTDRPDADTAVLEMTCGKGGYV
RSIARDLGKTLGCHAHVLTLRRLWSGPFDLENAVTLEQIDAEARTPDLDARLLPVEAGLT
DLPELKATAEGATRLRNGNPGMVFAAGDVEYGDEAWASHEGRPVAVGRYKAGELHPARVF
NLPDA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagcgcaagggccgggacatctccggctggctgatcgtcgacaaaccggcg
ggcatgacgtcgaccgccgtcgtgaacaaggtccgctgggcgctggaagccaagaaagcg
ggccatgccggcacgctcgacccggaggcgaccggccttctcgccgtggccctgggcgag
gcgacaaagaccgtgccctacatcaccgacgccacgaaggcctatgccttcaccatccgg
ctgggccaggcgaccaacaccgacgacaccgagggcgagatcacggcccaaagcgacctg
cgccccaccgatgacgagatcaaggaggcgctgcacggcttcgtcggagagatcatgcag
gtgccgccgcagttctcggcggtgaagatcgacggcgaacgtgcctacaagcgcgcccgc
gacggcgaggagatggacatcgccgcccgtcgcctctgggtcgaagagctggtgctcacc
gaccgccccgacgccgacaccgccgttctggaaatgacctgcggcaagggtggctacgtc
cgctccatcgcgcgtgacctcggcaagacgctcggctgccatgcgcatgtcctgacgctc
cgccgcctgtggtccggccccttcgacctcgaaaacgccgtgacgctggagcagatcgac
gcagaggcccgcacccccgacctcgacgcccggctcctgccggtcgaggcggggctgacc
gacctgccggaactcaaggccaccgccgagggcgcgacccgcctgaggaacggcaacccg
ggcatggtctttgccgcgggcgacgtcgaatacggcgacgaggcctgggccagccacgag
ggccgcccggtcgccgtgggccgctacaaggccggtgaactccaccccgcccgcgtcttc
aacctgcccgacgcctga
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