Sagittula stellata: ABFK29_12125
Help
Entry
ABFK29_12125 CDS
T10517
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sstl Sagittula stellata
Pathway
sstl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sstl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABFK29_12125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstl02000
]
ABFK29_12125
Transporters [BR:
sstl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ABFK29_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XAY77285
LinkDB
All DBs
Position
complement(2554743..2556458)
Genome browser
AA seq
571 aa
AA seq
DB search
MYGEPALPPDFVSLPYANPDAPKGGKIVLGEVGSFDSLNPHILKGTPPWQLRFLAYESLM
GRSYDEPFTLYGVLAESIEVGPNREWVEFTLRPEAKFSDGSPVTVEDVMWSYETLGTKGH
GRYRGFWAKVDSMEQTGERSVRFIFNEDNRELALLAGMRPILKKAQWDGVDFENSGLDVV
PITSAPYQITDYEPGRFVELTRDPDYWGKDVPFKVGTDNLDTIRMEFFADATAHFEAFKA
GVITSLRETNVETWNSQYDFPAVRNGDIVKSEIGHQRPTGIYGFVMNTRRELFADWRVRD
AMLHVFNFEYINDVQTGGVQPRITSYYSNSELGMRDGPAEGKVRELLEPFADALLPGALE
GYSLPVADGTVRNRANTAQALDLMAEAGYTIEDGVMTSPEGEPVTFEILIRQGQTDNVSI
AEIFSTSLKRLGIDATVVMVDSAQFEDRTKSYDFDMAYYERGLSLSPGNEQYLYWGAAGV
DTPGTGNWMGMNSPAADAMIGEMLTADSHDDFVSAVRALDRVLTTGRYVIPIMYRYDLSR
IAHAKQLKYPEKLPVYGDWLGFQPDVWWWEE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtatggggagcccgcgcttccacctgattttgtgtccctgccctacgccaatcccgac
gcgcccaaaggcggcaagattgtcctgggcgaggtcggcagcttcgacagcctcaatccc
catatcctgaaaggcacgccgccctggcagttgcgttttcttgcgtacgaaagcctgatg
ggccgcagttacgacgagcccttcacgctttacggcgtcctggccgaatcaatcgaggtc
ggaccgaatcgcgaatgggtcgaattcaccctcagaccggaggcaaaattctctgacggc
agcccggtgacggtcgaagacgtgatgtggtcctacgaaacgctcggcacaaaggggcac
gggcgataccgcggtttctgggccaaggtcgacagcatggagcagaccggcgaacgttct
gtccgtttcatcttcaacgaggataaccgcgaactggccctgttggcggggatgcgtcct
atcctgaagaaagcgcaatgggacggcgtggacttcgaaaactccggcctcgacgtggtt
ccgatcacatcggcgccgtatcaaatcaccgattacgaacctggccgtttcgtcgaactg
actcgcgatccagattactggggcaaggacgtgccattcaaggtcggcaccgacaatctc
gacacgatccggatggagttctttgccgacgctaccgcgcatttcgaggcattcaaggcc
ggtgttataacgtcgctgcgcgagaccaatgtcgaaacgtggaactcgcaatacgatttc
cccgccgttcggaatggcgatatcgtcaaatcggaaatcggccaccagcggcctaccggg
atatacggtttcgtcatgaacacccggcgcgagctgttcgccgattggcgcgtgcgggat
gccatgctccatgtgttcaacttcgagtacatcaacgacgtccagaccggcggcgtgcaa
ccgcggatcacctcctactattcgaactccgaacttgggatgcgcgacggcccagcagag
ggcaaggtgcgcgagctgctggaacccttcgccgacgcgcttttgcccggcgcactggag
ggctacagcctgccggtcgccgacggcacggtgcgcaaccgggcgaacacggcacaggcg
ctcgacctgatggcagaggccggttacacgatcgaggacggtgtcatgacctcgcccgag
ggcgagcccgtcaccttcgagatcctgatccgtcaaggccagaccgacaacgtttccatc
gccgagatcttctccacctcgctcaagcggcttggcatagatgcgacggtggtcatggtg
gattccgcccagttcgaagaccgcacgaagtcctacgacttcgacatggcgtattacgaa
cgtggcctgtcgctgagccctggcaacgagcagtacctctactggggcgcggcaggcgtc
gacacgcccgggaccggcaactggatggggatgaacagcccggccgccgatgcgatgatc
ggcgagatgctgaccgccgacagccacgacgacttcgtctcggctgtgcgtgctctggac
agggtgctcacgaccggccgctacgtgatcccaataatgtaccgctacgatctcagccgc
atcgcccatgcaaagcaactgaagtatccggaaaagctgccggtttacggcgattggctg
ggcttccagcctgatgtatggtggtgggaagagtga
DBGET
integrated database retrieval system
