Sagittula stellata: ABFK29_17590
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Entry
ABFK29_17590 CDS
T10517
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sstl Sagittula stellata
Pathway
sstl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sstl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABFK29_17590 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstl03019
]
ABFK29_17590 (pnp)
03016 Transfer RNA biogenesis [BR:
sstl03016
]
ABFK29_17590 (pnp)
Enzymes [BR:
sstl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABFK29_17590 (pnp)
Messenger RNA biogenesis [BR:
sstl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABFK29_17590 (pnp)
Transfer RNA biogenesis [BR:
sstl03016
]
Prokaryotic type
tRNA degradation factors
ABFK29_17590 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XAY78325
LinkDB
All DBs
Position
complement(3687468..3689609)
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AA seq
713 aa
AA seq
DB search
MFKEVKKTLQWGEETLTLETGKVARQADGTVIATLGETSVMANVTFAKTQKEGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGYEDGSYVLNPTVDDMHLLRDNPDQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVMFAHEQIQPVIDLIIDLAEDAAKEPFEFT
PPDYSELFGVVKAAGEEKMKVAYAISDKQERVAAVAAVKDEIKAGLSEEQLADANLGSAL
KKLESQVLRSDVVVNKRRIDGRALDQVRSIVSETGILPRTHGSALFTRGETQALVVTTLG
TGDDEQMIDALQGTYKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRLVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLVLEEDGSYG
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMKTALSQAKEGRMHILGE
MSKAISEAGSFSEHAPRIETMNIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIKI
ASPNGEAIQKAYDMIYAIVAEPEEGHVYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVYVKLLGFDDRGKVRLAMKMVDQETGEEMAKEKEAEQAD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaagtgaagaaaacactccagtggggcgaagagacgctgacactggaaacc
ggcaaggttgcgcgccaggcagacggcaccgtgatcgccactctgggcgagacctcggtc
atggccaacgtgacctttgcaaagacgcagaaggaagggcaggacttcttcccgctgacc
gtccattaccaggaaaaatactacgccgccggcaagatcccgggcggcttcttcaagcgc
gaggcgcgtccgaccgagaaggaaacgctgaccgcgcgcctgatcgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagtgctggtgatgtgcaccgtgctgagccat
gacctcgtcaacgatcccgacatcgtggcgatgatcgcggcctctgccgccctgacgatc
tctggcgcgcccttcatgggcccgatcgccggtgcacgcgtcggctacgaggacggatcc
tacgtgctgaacccgaccgtcgacgacatgcacctgctgcgggacaacccggatcaacgt
ctggacctcgtggttgcgggcaccaaggacgccgtcatgatggtggagtccgaggcttat
gagctgaccgaggacgagatgctgggcgccgtgatgttcgcgcacgaacagatccagccg
gtcatcgacctgatcatcgacctggccgaagatgcggcgaaagagccgttcgagttcacc
ccgccggattactcggaactgttcggcgtcgtgaaggcggcgggcgaagagaagatgaag
gtcgcctatgcgatctctgacaagcaggagcgcgttgccgctgttgccgccgtcaaggac
gagatcaaggcagggctcagcgaagagcaactggccgacgccaacctcggctccgcgctg
aagaagcttgagtcccaggttctgcgttccgacgtggtcgtcaacaagcgccgcatcgac
ggccgcgcactggaccaggtccggtccatcgtttcggaaaccggcatcctgccgcggacc
cacggttcggccctgttcacacgtggcgagacgcaggcgctggtcgtgaccacgctgggc
accggcgacgacgagcaaatgatcgacgcgctgcagggcacttacaagtccaacttcctg
ctgcactacaacttcccgccgtactcggtcggcgaagtgggccgcgtcggctcccccggc
cgtcgcgagatcggccacggcaagctggcatggcgcgccctgcaggcagtcctgcccgcg
gcaacggacttcccctacacaatccgcttggtctccgagatcaccgagtccaacggttcg
tcctcgatggcgtccgtctgcggcggttcgctgtccatgatggacgcgggcgttccgctg
aagtcggccgtggccggtgtggccatggggctggtgcttgaagaggacggctcctacggg
atcctgaccgacatcctcggcgacgaggatcaccttggcgacatggacttcaaggtcgca
ggcaccgagaacggcatcacgtcgctgcagatggacatcaaggtcgcgggcatcacccct
gagatcatgaagaccgcgctgtcccaggccaaggaaggccggatgcacatcctcggcgag
atgtcgaaagccatctccgaggcgggctcgttctctgaacatgcgccgcgcatcgagacg
atgaacatcccgaccgacaagatccgtgaagtgatcgggtccggcggcaaggtcatccgt
gagatcgtggaagtgtccggcgcgaaggtggacatcaacgacgacggcgtgatcaagatc
gcctcgccgaacggggaagccatccagaaggcctatgacatgatctacgcgatcgtcgca
gagccggaggaaggccatgtctacaagggcaaggtcgtgaagatcgtcgacttcggcgcc
ttcgtgaacttcttcggcaagcgtgacggccttgtgcacgtcagccagatcgagaaccgc
cgcctgaaccacccgtcggatgttctgaaggaaggccaggaagtctacgtgaagcttctg
ggcttcgacgaccgtggcaaggtgcgccttgccatgaagatggtcgaccaggagaccggc
gaagagatggcgaaggaaaaggaagccgagcaggctgactga
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