Sagittula stellata: ABFK29_24060
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Entry
ABFK29_24060 CDS
T10517
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sstl Sagittula stellata
Brite
KEGG Orthology (KO) [BR:
sstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstl03000
]
ABFK29_24060
Transcription factors [BR:
sstl03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABFK29_24060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activ_2
Sigma54_activat
AAA_lid_14
GAF
HTH_8
HTH_30
HTH_AsnC-type
HTH_50
HTH_23
AAA_16
HTH_psq
AAA_22
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
XAY81626
LinkDB
All DBs
Position
unnamed2:128915..130648
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AA seq
577 aa
AA seq
DB search
MRDLDHVAEIDRVLRGQDTGRDSLVADSWRRCVESYGMDPTRAEAAHIVTDAELRAHREQ
SERLIATARSGLQALFRQVAGQNYVLLLADAKGVCVDFFGDPRFEDDLRQAGLYLGSNWT
EDLAGTCGVGSCIVTGEAVTIHQGDHFGLAHTPLSCTSAPIYDTCGKLTAVLDISLLRSP
SPKSSQNLAMNLVRASVRRVEMANLMAMTRRDWVLRVSASPEFLEVDPEAAVALDGSGRI
IGMTHGARDILAPGGGALIGQRIDALIDLSVDDLPDLMRGRPSEDRVLRLRDGRGLYGHA
IAPQAARVPLRHRDTALPAPLAGFAGPDPVLDPLLRTAARLAPTRVPLLLTGESGTGKER
LARAIHMSGPARAFHAVRCAGAAFDTLEDAAPGTLFLRGIDDLDSKAQAALLTLIERRED
LRVIASARMPLATRLAEGSFRDDLYYRLSGARLDLPPLRLRHDTDWLIDRLMRPFAADGM
RLSPQARAELLARDWPGNIRELQHTLAIAAAVTEGQVIDLPDLPQPAPATTEDTSDEDLQ
SLLDACHWNMARAARRLGVNRSTILRRVRKAGLAPPG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatctggatcatgtggccgagatcgaccgggttctgcgcgggcaggacaccggg
cgcgacagccttgtcgccgacagctggcggcgctgcgtggaaagttacggcatggacccg
acccgcgcagaggccgcccatatcgtcaccgacgccgaactgcgcgcccatcgggaacag
tcggaacggctgattgccaccgcgcgctccggccttcaggcgctgttccggcaggtcgcg
gggcagaactacgtgctgttgctggcggatgcgaagggcgtctgcgtcgacttcttcggc
gatccccggttcgaggacgatctgcggcaggccgggctctaccttggctccaactggacc
gaggatctcgccgggacctgcggtgtcggctcctgcatcgtgaccggcgaagctgtgacg
atccatcagggcgaccatttcgggctggcgcatacgccgctgtcctgcacctccgcgccg
atctacgacacctgcggcaagctgacggcggtgctggacatctcgctcttgcggtcgccc
tcgccgaaatcctcccagaacctcgcgatgaaccttgtccgggcgtcggtgcggcgggtg
gagatggccaacctcatggcgatgacgcggcgcgactgggtgctcagggtctcggcctcg
cccgagttcctcgaggtcgatccggaggcggcggtcgcgctcgacgggtcggggcgcatc
atcggcatgacgcatggcgcgcgcgacatcctcgcccccggcggcggggcgctgatcggg
cagcggatcgacgcgctgatcgacctgtcggtggacgacctgcccgacctgatgcgcggc
cgcccgtccgaggaccgggttttgcggttgcgggacgggcgcgggctgtatggtcacgcc
atcgccccgcaggccgcgcgcgtgcccctgcgccaccgcgacaccgccctgcccgcccca
ctggcggggttcgccgggccggacccggtgctggaccctctgctcaggaccgccgcgcgg
ctggcgccgacccgcgtgccgctgctgctgaccggcgaatcggggaccgggaaggagcgg
ctcgcacgggccatccacatgagcggccccgcccgcgcctttcacgccgtccgctgcgcc
ggcgccgccttcgacacgctggaggacgcggcgcccggcacgctgttcctgcgcggcatc
gacgacctcgactcgaaggcgcaggccgcgcttctgacgctgatcgaacggcgcgaggat
ctgcgggtgatcgcctctgcccgcatgccgctggccacccgcctggccgagggcagcttt
cgcgacgacctgtattaccgcctgtcgggcgcccgtctcgacctgccgccgctgcggctg
cgccatgacaccgactggctgatcgaccggctgatgcgccccttcgccgccgacgggatg
cgcctgtcgccgcaggcccgcgccgaactgctggcccgcgactggcccggcaacatccgc
gagttgcagcacacgctggccattgccgccgccgtgacggaaggacaggtgatcgacctg
cccgacctgccgcaacctgcccccgccacgaccgaggacacctcggacgaggatctgcaa
tcgctgctggacgcgtgtcactggaacatggcgcgcgcggcccggcggcttggcgtcaac
cgatccaccatcctgcggcgcgtgcgcaaggccggcctcgccccgcccggctga
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