Solanum stenotomum: 125841156
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Entry
125841156 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC125841156
KO
K13210
far upstream element-binding protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125841156
03041 Spliceosome [BR:
sstn03041
]
125841156
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125841156
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125841156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
125841156
NCBI-ProteinID:
XP_049376176
LinkDB
All DBs
Position
10:37278586..37284376
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AA seq
647 aa
AA seq
DB search
MAEEDVHYASEVGTNKRKYEEEQTISRKPTGFSAPISSQSPDASYNTVPPPMDDFQLAKQ
KAQEIAARLLNTAEPKKARVDNGSGFDSVEHKPFVNPAVTNSYGYPGPSKKIEVPNARVG
VIIGRGGETIKYLQLQSGAKIQVTRDMDSDPHSRTRGVELVGTPEQIAKAEQLISDVLSE
ADAGGSGIVSRRITGQVAGAEQFVMKVANNKVGLIIGKGGETIKNMQGRTGARIQVIPLH
LPPGDTSTERTVQIDGSTEQIEAAKQLVYEVTSENRVRNPGMAGGYPQQGYQTQPPASWA
PPGAQMQQPGYGYLQPGAYPGPSPQYNRSQPPYPGYPPQQASGGYASGWDQTTAPNQQTS
QAGGYDYYSQQAPPQQQQTPGGSAASTDTTAYGYNQPSATGYNQGQSYSQDGYGGYHAPA
AHSGYQGTGYDQQQGYSSTPSYGNVPNPTSDGHNTSHGTQGDGSQAPAPAQSSAVGQQGY
QSGQQPSPTPSYPSQGSTQAGYGMPPTSQGGYGTQSAAGYGPPQAQKPLTSLPAYGQPQQ
SPSAQGGYAQPPPVQPGYPQAATAQSGYGQGDSGTQRPPSSYGTPTAHPGYGAASYGQQP
PPYSSAYAGGYVQPPAAYSSDGNGVANPTSQSVQPSLGGVPKASPQS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggacgtccattacgcatcagaggttggaaccaacaagaggaagtacgag
gaagagcagactatttcccgtaaacccactggattctctgccccgatttcttcccaatca
cctgatgcttcttacaacaccgttcctccgcctatggatgatttccagctcgctaagcag
aaggctcaggaaatcgccgctaggctattgaacaccgcggagcccaaaaaagcgcgagtt
gataacggctctggatttgattctgtcgaacacaaaccctttgttaatccagctgtgaca
aattcatatggttatccggggccaagcaagaagattgaggtaccaaatgctagagttgga
gtgatcataggcaggggtggggagacaatcaagtatcttcaactacagtctggagccaag
attcaggttactcgagacatggattctgatccacattctcgtactaggggggttgaactc
gtgggtacaccagagcaaattgctaaggctgaacaattaattagtgacgttctttctgag
gctgatgcaggaggttcaggcatagtttcccggaggataactggacaggttgctggggca
gaacaatttgtaatgaaagtcgccaacaacaaggttggtcttattattggcaaaggaggt
gaaaccataaaaaatatgcaaggaaggactggagcgcgtattcaggtgattcctctacac
ttgcctccaggtgatacatcaacagaaaggacagtacaaattgatggatcaactgaacag
attgaggctgctaagcagctggtgtatgaagttactagtgagaatcgtgttagaaatcca
ggaatggctggaggatatcctcaacaaggttatcaaactcaacctcctgcaagctgggct
cctcctggtgcgcagatgcaacaacctggttatggttaccttcaacctggagcatatcca
ggtccatctccccaatataacaggtctcaaccaccctaccctggttaccctccacaacag
gcctctggtggatatgcctctggttgggatcagacaactgcaccaaatcaacaaacgtct
caggcaggtggttatgattactatagtcagcaggcacccccacaacagcaacaaacacct
ggaggttcagctgcttcaactgatactactgcctacggttacaatcagccttcagccaca
ggttacaaccagggacagagctactcccaagatggctacggcggatatcatgcacctgct
gctcactctggttatcagggtactggttatgatcagcaacaaggttatagctctactcca
agctatggtaatgtaccgaacccaacttctgatggccacaacacttcacatggtacgcaa
ggtgatggcagtcaagcacctgcaccagctcagtcttcagccgtgggccaacaaggctat
cagtctggccagcagcccagccctactcctagttacccatctcaaggctctactcaagct
gggtatgggatgccacctacttcccaaggtgggtatggcacccagtcagcagcaggttat
gggccccctcaagcccaaaagcctctgactagtcttccagcttatggtcagcctcagcaa
tctcctagtgcacaaggtggctatgcccaacctccaccggtgcagcccgggtatccacag
gcagcaactgctcaatcaggttatggtcagggtgattctgggactcagcgacctccatcc
tcttatggcactccaacagctcaccctggatatggggctgctagctatggacagcagcca
ccaccttacagtagtgcctatgctggcggttatgtgcagcctccggcagcgtactcttct
gatggcaatggtgttgcaaatccgacatcccagtctgttcaacctagtctggggggggtt
ccaaaagcctcacctcagagttaa
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