Solanum stenotomum: 125841171
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Entry
125841171 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125841171
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125841171
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125841171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
KH_1
KH_KhpA-B
KH_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
125841171
NCBI-ProteinID:
XP_049376191
LinkDB
All DBs
Position
10:37912259..37922109
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AA seq
334 aa
AA seq
DB search
MASTQQTLPPDPGEKIQGEEAQFSTVPIHVVTNPSELPVEFLEPSAETQLVIGFDCEGVD
LCRHGTLCIMQLAFPDAIYLVDAVQGGEAVVQACKPALESNYITKVIHDCKRDSEALYFQ
FGIKLHNVVDTQIAYSLINEQEGHARVPDCHISFVGLLADPRYCGVSYDEKEEVRVLLRQ
DPKYWTYRPLSEQMIRAAADDVRFLLHIYHKMVQKLNDKSLWNLAVRGALYCRCFCINDN
HFADWPPLPPIPENIVADGSIPEEEVLSVVDVPPGKMGRVIGRRGASILSIKQSCDAEIF
IGGAKGPPDKVFIIGPEKQARKAQAILMGKLLDF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctactcaacaaactttgcctcctgaccctggtgaaaaaatccaaggggaagag
gcacaattttctacagtgccaatccatgttgtcactaatccatctgaactacctgttgaa
ttcttggaaccttctgctgagacacaactggtgattggttttgattgtgagggtgttgat
ctttgtcgccatgggactctctgtattatgcagcttgcgtttccggacgcaatatatttg
gttgatgctgttcaaggtggggaggctgttgtccaagcttgtaagcctgcactcgagtct
aactacatcacaaaagttattcatgattgcaaacgagatagtgaggcattgtattttcag
tttggcataaagttgcacaatgttgtggatacacagattgcatattctttgatcaatgaa
caagaaggacatgcacgggtcccagattgtcacatatcatttgttggtctacttgctgac
ccacgttattgtggagtatcttatgatgagaaagaagaagtcagagttcttctaagacag
gaccccaagtattggacatataggccattgtctgaacagatgatccgtgctgctgcagat
gacgtccgatttcttctccatatataccataagatggtgcaaaagctgaatgacaagtcc
ttatggaacctagctgtccgtggtgccctctattgtcgctgtttctgcatcaatgacaat
cattttgcagactggccgcctctacctccaattccagaaaatattgttgctgacggaagt
atccctgaggaagaagttttgtctgttgttgatgttcccccggggaaaatgggacgtgtt
attggcagaaggggagcttctatattgtcgataaagcagtcatgcgatgctgaaatattc
atcggaggtgctaaaggtcctcctgataaggttttcatcattggaccagaaaagcaagcc
agaaaagcccaagccattctaatggggaaactgctagatttctga
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