Solanum stenotomum: 125841187
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Entry
125841187 CDS
T08385
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
sstn
Solanum stenotomum
Pathway
sstn04016
MAPK signaling pathway - plant
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125841187
04075 Plant hormone signal transduction
125841187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125841187
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125841187
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
LRR_RPS2
F-box-like
LRR_At5g56370
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
125841187
NCBI-ProteinID:
XP_049376219
LinkDB
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Position
10:complement(31613594..31617106)
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AA seq
669 aa
AA seq
DB search
MSKVFNFSGDDAFYHGGAVYPSPKESSLFLSLRNHVDVYFPPCKRSRVAVPFVFTEKKQK
LSSIDVLPDECLFEVLRRLSDGKERSASACVSKRWLMLLSSIRGDETVISDLNPSLETEE
RSIQIALVKPVDCVKKGEVLDSNGAEVADAESQDIEGEGHLSRCLDGKKATDVRLAAIAV
GTPSHGGLGKLSIRGSNPIRGVTDTGLKAIARGCPSLRALSLWNVSSVSDEGLIEIAQGC
HLLEKLDLCQCPAITDLSLMAIAKNCPNLTSLTIESCSKIGNETLQAVGRFCPKLKFVSL
KNCPLIGDQGIASLFSSAGHVLTKVKLYALNISDISLAVIGHYGIAVTDVVLIGLQNINE
RGFWVMGNGQGLQKLRSLAITACHGVTDLGLEALGKGCPNLKLFCLRKCTILSDNGLVAF
AKGSVALENLQLEECHRITQAGFVGVLLSCGKKLKVLSMVNCFGVKELACRFPSVLPCNS
LQSLSIRNCPGVGNATLAIVGRLCPKLTHLELSGLLEVTDEGLFPLVQSCEAGLVKVNLS
GCVNVTDRSVSFITELHGGSLESLNVDECRYVTDATLFAISNNCWLLKELDISKCGITDS
GIASLASTVRLNLQILSLSGCSMLSDKSVPFLQKLGQTLMGLNIQHCNGVSSSCVDLLLE
QLWRCDILS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtcttcaattttagtggtgatgatgctttttaccatggtggggctgtgtac
ccaagtcccaaggaatccagtctatttctgtcccttaggaatcatgtggatgtctatttt
cctccttgcaagaggtctcgtgttgcggtcccttttgttttcactgaaaagaagcagaag
ttgtcttccattgatgtcctacctgatgaatgcctttttgaggtattgaggcgcctttct
gatggcaaagagaggagtgcctctgcttgcgtttccaaacgctggcttatgcttttaagc
agcatccgcggggatgaaacagtcatctcagatctcaatccatctttggagaccgaggaa
agatctatccaaatcgcccttgttaagcccgtggactgtgtcaagaagggtgaggtattg
gactctaatggtgcagaagttgctgatgctgaatctcaagatattgaaggagagggtcat
ctttccaggtgccttgatggaaagaaagcaacagatgtccgacttgctgctattgctgtt
ggaactccaagccatggagggttagggaagctttctattcggggaagcaacccaatccgt
ggtgtgactgatactggccttaaggctattgctcgaggttgtccttctcttagggctctt
tctctctggaatgtatcttctgttagtgatgaaggtttaattgagattgctcagggatgt
catctcttagagaagcttgatctatgccaatgccctgcaattactgatctgtctttgatg
gctatcgcaaagaattgtcctaatttgacctctctaacgatagaatcttgttcaaagatt
ggaaatgaaactcttcaagctgtaggtcgtttttgcccgaagttgaagtttgtgtctctc
aaaaactgcccactcattggagatcaaggaattgcaagtctcttttcatctgctggtcat
gttttgacaaaggtgaaactttacgcattgaacatcagtgacatctcccttgctgttatt
ggacattatggcattgccgtgactgacgtagtccttattggtcttcaaaacataaatgag
agaggattttgggtcatgggtaatggccaaggtttgcagaagctgaggtcgcttgctata
actgcttgccatggagttactgatttgggacttgaagctcttggtaaaggttgtccaaac
ttgaagctgttctgcctgcgaaaatgtacaatcctgtcagataatggcttggttgctttt
gccaaaggttcagttgcactagagaacctccaattagaagaatgccacaggatcacccag
gctgggtttgttggtgttcttttgagctgtggtaagaagttaaaggttctgtccatggtg
aattgctttggtgttaaagagttagcctgtcgatttccatctgtgctaccttgcaactca
ctgcagtctttgtctattcgcaactgccctggagttggtaatgctacgctggccatagtg
ggtaggctgtgccccaaattgactcatttggagttgagtggccttcttgaagtaactgat
gagggtcttttccctcttgttcagagctgtgaagctggtttggtcaaggtgaatctaagc
ggatgtgttaatgttacagacagatcagtttcattcataactgagttgcatgggggaagt
ctcgagtctcttaatgttgatgagtgtcgatatgttactgatgcgaccttgtttgcaatt
tccaacaactgttggttgctcaaggaacttgatatttcaaagtgtggaataactgattca
ggtattgcatctttggccagtacagtgcgacttaatttgcagatcctctcattgtcgggt
tgctctatgctttcggacaaaagtgtaccctttctgcagaagttggggcagacacttatg
ggcttaaacatccagcactgcaatggggtcagtagcagctgtgttgatcttctcttggaa
caactctggaggtgtgatatcctttcttaa
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