Solanum stenotomum: 125841192
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Entry
125841192 CDS
T08385
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125841192
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125841192
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
MRF_C2
Motif
Other DBs
NCBI-GeneID:
125841192
NCBI-ProteinID:
XP_049376223
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Position
10:complement(31944284..31948631)
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AA seq
398 aa
AA seq
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MKGQAFIFLVCITSFLIERSLAGIFDVTRYGASGDGVHDDTQAFKQVWRAACSDENPSIL
IPSERSFLVGPITFQGPCKSTNIHIQLSGSIVAPKDPEAWTGCENVCWIYFTGVAGLFIN
GSGTINGNGQRWWDTPSRTRVNGTCTKPTVVQFNYCNGLRLNGIKLVNSSRDHIILTYNK
GVTISNIHISAPNYSRNTDGIDIFFSSQVQIRDSIIQTGDDCIGINTGCSDINITGIRCG
PGHGISIGSLGPNNTFANVENVYITNCHLEDTQNGVRIKSWQGGSGYARSIHFENINLKN
VENPIIIDQNYCNGGHSCQPQVSAVKVSNVTYKKIYGTTSSKLAINMNCSNSTACTNVEL
ENIYITSVEPGKKIFATCNNVKGKASSNSPHVSCLSQG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtcaggcattcatctttctggtttgtattacttcatttcttattgaaagaagt
cttgctggtatttttgatgtaacacgttatggcgcttctggagatggagtgcacgatgac
actcaagcattcaaacaagtttggagagctgcgtgtagtgatgaaaatccatcaatactt
ataccaagtgaaaggtcatttctagtagggcctattacatttcaagggccttgtaagtca
accaatattcatatacaattatcaggatctattgtagcacccaaggacccagaggcatgg
acaggttgtgaaaatgtatgttggatttattttacaggagttgctggtctttttatcaat
ggttctggtactatcaatggcaatggccaacgatggtgggatactcccagccgtaccagg
gtgaacgggacttgcactaagccaacggtggttcaatttaattactgtaatggacttaga
ttgaatggaataaagctagtgaatagttcaagggaccatataattcttacttataacaag
ggagtaacgatctcaaatattcatataagtgcaccaaattatagtcgcaatactgatggt
atcgatatctttttctctagccaagttcaaattcgagactccattattcaaacaggtgat
gactgcattggcatcaatactggatgctctgatatcaatattactggtattaggtgtgga
ccaggtcatggtataagtattggaagtttaggtccaaataatacatttgctaatgtggaa
aacgtttatataacaaattgccacttagaggatacccaaaatggtgttagaattaagtca
tggcagggtggttcaggatatgctaggtctatacattttgagaatattaacctcaaaaat
gtagaaaacccaatcattattgatcaaaattattgcaatggtggtcattcatgtcaacct
caggtaagtgcagttaaagtgagcaatgtaacatacaagaaaatatatggaactacaagc
agcaagctagcaataaatatgaattgtagtaatagcacagcttgcaccaatgttgagttg
gagaatatctacataacttcagttgagcctggaaaaaagatttttgctacttgcaataat
gttaaaggaaaagcctcttcaaactcacctcatgtatcttgcttgtcacaaggataa
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