KEGG   Solanum stenotomum: 125841203
Entry
125841203         CDS       T08385                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125841203
Enzymes [BR:sstn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125841203
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    125841203
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 LAMTOR
Other DBs
NCBI-GeneID: 125841203
NCBI-ProteinID: XP_049376234
LinkDB
Position
10:complement(43221655..43259226)
AA seq 2144 aa
MASDTPRARIDQFFASKKKRKSLSPSLKPTRAKKDVKTTQEGSPSTKGLLNGYLVTSQDD
SKSSHIARGTPVKRNLTLEIGPYVKDENKESTFLVEAQSTTTEAKTSKEKSDIPSDSHVV
ENRGHGKDVLVTTQVNGNSELKQFATNFLSLYCSELPSSLSLPSAQCEGGSKRSGSPPLL
EVDNKNAKRIRCISSENDSNINRRSNSECAALNSIEITEGNTSGEARISLRKCNNVPVIG
SAESETPGSTSTKLRIGVTPNSTRGSSIFSPGEAFWNEAIQVADGLFEGSDKFSSQAALE
SDALKNHNEVINSNSLGNGECGNKSHQVLNEGIETVSDAGIVSAIGSLRKLGKDLDGEKS
PMPVKHFDFASDEKNFDFVQSHRSNLDILTVSGKRTGSQDHLSLSGYPVLSPHKAAQAKG
NILEVQNKTPECPVSKGKDVLIQGTDIMASTTPPEKLNSYTANSLSSKDNTPSSIAPLKN
HSDLNHWLPSEVCNIYRKKGISKLYSWQVDCLQVDGVLHNRNLVYCASTSAGKSFVAEIL
MLRRILSSGKMGLLVLPYVSICAEKAEHLEVLLEPVGKQVRSYYGNQGGGSLPKDTAIAV
CTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQNRGYLLELMLTKLRYASGEGNTES
SSGETSGTSSGKVDPAGSLQIVGMSATLPNVTAVADWLQAALYQTEFRPVPLEEYVKVGN
TIYNQKMDIVRTISKAADLGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAK
HLKRFSLNQLSGQNESIDITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETV
ETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDT
KGESVLICKPEEVKRITALVNESCPPLHSCLSEDKNGMIHAILEVVAGGIVQTASDINRY
VRCTLLNSTKPFDDVVKSAQDSLRWLCHKKFLGWSEDTKLYTVTPLGRAAFGSSLSPEES
LVVLDDLIRAREGFVLASDLHVVYLVTPINVDLEPDWELYYQRFMELSTLDQSVGNRAGV
QEPFLMRMAHGAPVRASYRSKAGTKGLQGKLDNRSLNDHMLSDENMLRICRRFFVALILS
RLVQEVPVIEVCGAFKVARGMVQALQENAGRFASMVSVFCERLGWHDLEGLVSKFQNRVS
FGVRAEIVELTIIPYVKGSRARALYKAGLRTPEAIAEASVPEMIKVLFESSSWADQGSAQ
RRIQLGVAKKIKNGARKIVLDKAEEARLAAFSAFKSLGLDVSTLAQPVISTAAGHGAHKE
ASTSSAEGSTSSFISLENANRISSTSIERSKEVNITIPDAGAENAKSKTIADKEAFHIEG
SNGLNAEVNESTHHIDNAKTSPYPTLKIKGIEGDGTCTDHNHAGKQHCEGAEICNVRVKE
TSEKGPMNATAVVGGFDTFLGLWEAAEEFYFDVHFSKKSALNSIAPFEIYGIAICWEDSP
VYYVNLPRDLFWSNSKRNSQSSPITSGDIGNVLPPNLQWEIAIHRWNRISTIMRKKDIKK
FTWNLKVQIQVLKHPTVSIQRVGGLSFLVKSLGVDLIDNNCYLLSPVPIQDAIDLCIVAW
VLWPDEEKGSNPSIEKEVKKRLSIEAAAAANRNGRWKNQMRQVAHNGCCRRVAQIRALRS
LLWKLVISEGLVEALGATEMPLVNVLADMELCGIGVDMEGCLQARQILGRKLKILEKEAY
KLAGMTFSLYTAAEIANVLYGHLQLPVPEGRKKGKKHPSTDKHCLDLLRNEHPIVPIIKE
HRTLAKLLNCTLGSICSLARLSMRTQRYTLHGHWLQTTTVTGRLSMEEPNLQCVEHMVDF
KMHNKDKDVCPLDVNNYKINARDFFVSTQDNWLLLTADYSQIELRLMAHFSKDSSLIELL
SEPQGDVFNMIAAKWTGKTEAIVSQEERDQTKRLVYGILYGMGAKSLAEQIDCSADEAAE
RIESFKRSFPGVASWLQEAVTSCREKGYIETLKGRKRFLAKINFGNSKEKSKAQRQAVNS
ICQGSAADIIKIAMINIHSVLDHFEKSLSHSAVDEKFHVLKGRCRIILQVHDELVLEADP
SVAKEAGLLLQMSMENAVSLLVPLHVKLKIGSTWGSLEPFQASE
NT seq 6435 nt   +upstreamnt  +downstreamnt
atggcttctgatactcctcgagcacgcattgatcaattctttgcttcgaaaaagaagagg
aagtccttatcaccgagtttgaaacctacaagagccaagaaagatgttaagactacacag
gaagggtctccttccacgaaaggtttgttgaatgggtatttagtgacttctcaagatgat
agtaaatcttcacacatagctagaggcacaccggttaagagaaacctgacgttagagatc
ggtccgtatgtaaaagatgaaaataaagagagtacttttctggtcgaagcacaatctaca
actactgaagcaaaaacttcgaaggagaagtctgatattccctccgactcacatgttgtt
gaaaatagaggtcatggaaaagatgtcttggttactacacaggttaatggaaactcagaa
cttaagcagtttgctacgaactttttgtcattatattgcagtgaactgccatctagttta
agtttaccttcagcacagtgtgagggtggtagtaaaaggagtggtagccctcccttactt
gaggtggataataagaatgcaaagagaatccgctgcatctcgagtgaaaatgattctaac
atcaacagaagatctaattctgagtgcgcagctttaaattctattgagataacagagggg
aatacatcaggtgaagctcggataagcttgagaaaatgtaacaatgtacctgtcattggg
tcagctgaatctgagacacctggttcaacatctacaaagcttcgtattggagttactccc
aattcaactcgtggtagctccattttttcacccggagaagcattttggaatgaagcaatt
caagttgctgatggtttgtttgagggaagtgataaattttcttctcaagcagcacttgag
tccgacgctttgaaaaatcacaatgaggtaatcaattccaatagtcttggaaacggagag
tgtggcaataagtctcaccaagtacttaatgaaggtatagagacagtttctgatgccggc
attgtttctgctattggttcattgaggaagttgggaaaggatctggatggagagaaatcc
ccaatgcctgttaagcattttgattttgcctctgacgaaaaaaatttcgattttgtacaa
tctcacagaagtaacttggatatcctgactgttagtggcaaaagaaccgggtcccaagat
catctaagtttgagtggatatcctgttcttagccctcacaaggcagctcaagcaaaaggg
aatatccttgaagttcaaaacaagactccagaatgtcctgtttctaagggtaaggatgtg
cttatccagggtactgatataatggcatcaacaacacctccggagaaacttaatagttat
acagctaattccttatcaagtaaagacaacactccttcaagtattgcaccactaaagaat
cattcagatctcaaccattggctaccttctgaagtatgtaacatttacaggaaaaagggg
atttcaaaattgtactcatggcaggttgattgtcttcaagtggatggagtcttgcacaac
cggaatcttgtatattgtgcttctaccagtgctggtaaaagttttgttgctgagatatta
atgttacggagaatcttatcatctggaaaaatgggtcttcttgtacttccatatgtatcc
atttgtgcagagaaggcagaacatcttgaggtccttctggaaccagttggaaagcaggtt
cgcagttattacggtaatcagggaggtggtagtctcccaaaggataccgctatagctgtt
tgcactattgagaaagcaaattccttaattaaccgactgctagaagagggccgtttgtca
gagcttggtatcatagtgattgatgaactccacatggttggagaccagaataggggttat
ctattggagttgatgttgaccaagcttcgctatgcatctggtgaaggaaatacagagtca
tccagtggagaaacttcaggcacgagcagtggaaaagttgaccctgctggcagtctccaa
attgttggcatgagtgcaactctccccaatgtgacagcagtcgcagattggcttcaagca
gctttgtatcagacggagtttcggcctgttccattggaagaatatgtaaaagtaggtaac
acaatttataaccaaaaaatggacattgtcagaacaatctcgaaagcagctgatcttggt
ggtaaagatccagatcacattgtggagctctgcaatgaggttgtccaagaaggcaactca
gtgctaattttctgctcaagtcgcaaaggatgtgaatctactgctaggcatgtggcgaaa
catcttaaaagattttccttgaatcaactgagcggccaaaatgagtcaattgatattact
tctgcaattgatgctttacgaagatctccagctgggttggatcctattctggaagagact
cttcctgccggtgttgcctatcaccatgctggactcacggttgaggaaagagaaacagtt
gaaacctgttaccgcaaaggacttgtacgtgtcttaacagctacatcaaccttagctgca
ggggttaaccttcctgctcggagagttatttttcgacaaccacgtattggtcgtgacttt
attgatggtacaaggtaccgacagatggctggtcgggctggtcggacgggtatagataca
aaaggagagagtgtgttgatctgcaaaccagaagaggtcaaacgaataacggcacttgtt
aacgagagctgtccaccgttgcattcttgtttatccgaagataagaatgggatgatccac
gcaatattggaagttgttgctggtggtattgttcaaacagctagtgatattaaccggtac
gttaggtgtacccttctcaattcaacaaaaccatttgatgatgtggttaaatcagcacaa
gattctcttcgctggttatgccataaaaaatttcttggatggagtgaagataccaaatta
tacacagtcacgcctcttggtcgtgcagcttttggaagttctctctctcctgaagaatca
ctggttgtcttggatgatttgattagagcgagggaagggtttgtgcttgcatctgatctg
catgttgtttacttagtgacacccattaatgttgatcttgagccagattgggaactgtat
taccagaggttcatggagttgtctaccctggatcagtcagttggcaatcgggctggagtt
caagaaccctttttgatgcgaatggctcatggtgcaccagttcgtgcatcttataggtca
aaggctggtactaaagggttgcagggaaagttggataacagatctctgaatgaccatatg
ctgtcagatgagaatatgcttcgcatctgtcggagattctttgtggctcttatactgtca
aggctcgtgcaggaagtgccggttatcgaggtttgtggtgcatttaaagttgcaaggggc
atggttcaggccttacaagaaaatgctggaaggtttgcttccatggtttctgttttttgt
gagaggcttggttggcatgaccttgaaggcttagtatcaaagttccaaaatcgtgtctca
tttggtgtgcgggcagagattgtagagctcaccatcattccatatgttaagggttcccga
gctcgagcactatataaagcgggtcttcggacacctgaagcaattgctgaagcatcagtt
cctgagatgatcaaagtactttttgagtcgtcatcatgggctgaccaaggttctgcacaa
cggaggatccaattaggagttgcgaaaaagataaaaaatggtgcacgcaagattgttctc
gataaagctgaggaagcaaggcttgctgcattctcagccttcaagtcgcttggacttgat
gtgtcaacgcttgcacagcctgtcatatctactgctgctggacatggtgctcacaaagaa
gctagtacctcctctgcagaagggtcgactagtagctttattagcctggagaatgcaaat
cgaatctcttccacatccatagaaagaagtaaggaggtcaatatcactattcctgatgct
ggagcagaaaatgcaaaaagcaaaacaattgctgacaaagaggcatttcatatagaagga
tctaatggtcttaacgctgaagttaatgaatctactcatcatattgataatgcaaagact
tccccttatcctactttaaaaattaagggcatcgaaggagatggtacatgtaccgatcat
aatcatgctgggaaacaacactgtgaaggagctgagatatgtaatgtaagagtcaaagaa
acatcagagaaggggcctatgaatgcgactgctgttgttggtggatttgatactttcctg
ggtctctgggaagctgctgaggagttttactttgatgtccatttcagcaaaaagtctgca
ctgaacagcattgccccatttgaaatatatggcatagccatttgttgggaagattctcct
gtctattatgtaaatcttccgagggacttattttggtccaacagcaaaaggaatagccaa
tcgtcgcccattaccagtggtgatattgggaatgttctaccaccaaatcttcagtgggag
atagcgatacaccgatggaatagaattagtaccataatgagaaaaaaagatataaaaaag
tttacatggaacttaaaagttcagattcaggtactcaagcatcctactgtttcaattcag
agagttggtggtttgagttttttggtcaaatctctcggagtggatcttattgacaacaat
tgctatctgttgtctcctgttcccattcaagatgcaattgacttgtgtatagtagcttgg
gtcctctggcctgatgaggagaaaggttctaaccctagtatagaaaaggaagtgaagaaa
aggttatccatcgaggctgctgctgccgctaatcgaaatggtagatggaagaatcagatg
cgacaagttgctcataatggttgttgtcgtcgagtagcacaaatacgagctttgcgttct
cttctatggaaattagtcatttctgaaggacttgttgaggcacttggagcaactgaaatg
ccattggtcaatgttcttgcagacatggagctctgcggaataggtgttgacatggaagga
tgcctacaggcacggcaaattctgggaagaaagctgaagattctggaaaaggaagcttac
aagttggctggcatgactttttcattgtacacagcagcagaaattgcgaatgtactctat
gggcatctacagcttcctgttccagaaggacgtaaaaaaggaaagaagcaccctagtact
gataagcattgcttggatttgctaaggaatgaacatccaatagtacctataattaaagag
caccgtactctagcaaaactcttgaattgtacattggggtcgatctgttcacttgctaga
ctatctatgaggacacagagatacacactgcatggtcattggctccagacgacaacagta
acagggcgactgtcaatggaggaacctaatcttcagtgtgttgaacatatggttgacttc
aaaatgcataacaaggataaagacgtttgtccgttagatgtcaataattataagatcaat
gctcgtgatttttttgtgtctactcaggacaattggttactattaacagcagattattcc
cagatagaactgagattgatggcccatttctctaaagattcctcgttgatcgaactgctt
agtgaaccccaaggtgatgtcttcaacatgattgctgcaaaatggacaggtaaaacagag
gctattgtgagtcaagaggagcgagatcaaactaaaaggttggtttacggcattctttat
ggaatgggggctaagagccttgcagaacaaatcgattgtagcgcagatgaagctgctgaa
agaattgaaagctttaaaagatcttttccaggtgttgcttcctggctacaggaagcagtt
acatcttgccgtgagaaaggttatatagagaccctcaagggacgaaagcgtttcttggca
aaaattaacttcggaaacagtaaggaaaagtctaaagctcagaggcaagctgtgaattct
atctgccaggggtcagctgcagacattatcaagattgcaatgataaacattcactctgtg
cttgatcattttgagaaatctctgtcccattctgcggttgatgaaaagtttcatgtgctt
aaaggacgttgtcggattattttacaggttcatgatgaattagtacttgaggctgatcct
tctgttgcaaaggaagctggattgttgttgcagatgagcatggaaaatgctgtttctctt
cttgtcccactgcatgtgaaactgaagattgggagcacatggggatcgttggaacctttc
caggccagtgaatga

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