Solanum stenotomum: 125841231
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Entry
125841231 CDS
T08385
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125841231
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125841231
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125841231
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
125841231
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125841231
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125841231
Prokaryotic type
125841231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125841231
NCBI-ProteinID:
XP_049376269
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All DBs
Position
10:46315635..46332753
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AA seq
676 aa
AA seq
DB search
MGTAYPRDENYLEIVVPRRIALFVSIQNQQRLQRLSLSPDPIKIELPNGTVKEGKKWNTT
PLDIAKEISKSLGSNALIAKVNGVLWDLLRPLESDCKLELFTFDSDEGRDTFWHSSAHIL
GESLERKYGCKLCIGPCTTRGEGFYYDAFYGDLGLNEDHFKGIEAEAAKAVLEKQPFERI
EVSRQQALDMFSDNRFKVEIIRDLPEDKTITVYRCGPLVDLCRGPHIPNTSFVKALACTK
ASSAYWRGDKDRESLQRVYGISYPDKKQLKEYLAMLEEAKKYDHRELTKKQELFFFHPLS
PGSCFFLPHGARICNKLLEFIRSQYWKRGYEEVWSPNMYNMQLWETSGHAANYKENMFVF
EIEKQEFGLKPMNCPGHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQ
QDDAHIFCRESQIKDEVKGVLEFISYVYKIFGFTFDLKLSTRPEKYLGDIETWVKAEAAL
SEALNEHGKPWEINEGDGAFYGPKIDISVSDAMKRKFQCATLQLDFQLPQRFNLSYSAED
ESKRERPVMIHRAILGSVERMFAILLEHFKGKWPFWLSPRQAMVCPVSDKSQSYALKLRE
QIHDAGYYVDVDTSDRTIQKKVREAQVAQYNYILVVGEAEATSGQVSVRVRDKPDHQAMT
VDVLLAHFKDMVASFQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgcctaccccagagacgaaaattatctagaaattgttgttcctaggcgtatc
gcactcttcgtatctatccaaaaccagcaacgccttcagcgcctttcactctcccctgat
cctatcaagattgagttaccgaatggaactgtgaaggaggggaagaaatggaatacaacg
cctttggatatagcgaaggagatatcgaagagcttgggttccaatgctttgatagcaaag
gtgaatggggtgctttgggatttgttgaggccattggaaagtgactgtaagctcgagctc
ttcacttttgacagtgacgagggtcgcgatacgttttggcactcgagtgcgcacattctt
ggggagtcattggagaggaaatatggctgcaaattgtgtattggaccttgtacaacaaga
ggagagggtttctattacgatgccttttacggtgatctggggttaaatgaggatcatttt
aaagggattgaggcagaggcagcaaaagctgtgttggagaaacagccttttgaacgcatt
gaagtttcacggcaacaagctcttgatatgttctctgataataggtttaaggttgaaatc
attagagatttacctgaagacaaaacaatcactgtatatagatgtggtcccttggttgat
ctatgccgtggtccgcatataccaaatacatcttttgttaaagcactagcttgtacaaag
gcttcatcagcatattggaggggagacaaggaccgagaaagcttgcaaagagtttatgga
atatcttatccagataagaaacagttaaaggaatatctagcgatgctggaggaagcaaag
aaatacgatcacagagagctgactaagaagcaggagcttttcttctttcatccattaagc
cctggaagttgtttctttcttccacatggtgctcgaatttgcaacaaattgctggagttc
atacggagtcagtattggaagagaggctacgaggaggtttggagtccaaatatgtacaat
atgcagttatgggaaacttctggtcatgctgcaaattataaggagaacatgtttgtgttt
gagattgaaaagcaagaatttgggctgaagccaatgaactgcccaggtcattgtttaata
tttgatcacagggttcgctcctacagggagctaccacttcgtctggctgactttggggtt
ctgcacaggaatgaggccagtggtgcacttactggcttaacacgtgtcaggagatttcag
caggatgatgcacacatcttttgcagagagtcacagattaaggatgaagttaagggtgtc
ttagagttcatcagctatgtgtataagatatttggtttcacttttgacctgaagttatca
acgaggcctgaaaaatatctcggagacatagaaacttgggtaaaggctgaagctgctctt
tctgaagcattgaacgagcatgggaagccctgggagatcaatgaaggagacggagcattt
tatggcccaaaaattgatataagtgtttctgatgcaatgaagaggaaattccagtgtgcg
acattgcagcttgatttccaactccctcaacgtttcaacctatcatactcagcagaagat
gaaagtaagagagagagaccagttatgatacatagagcgatccttgggtcagttgagcgt
atgttcgctattcttttggagcatttcaaagggaaatggcctttctggcttagtccacgt
caagctatggtctgccctgtttccgataaatcgcagtcatatgcacttaagctccgggag
cagatacatgatgctggttattacgttgatgttgatacaagtgacaggacaatccagaaa
aaggtacgagaggctcaagtggcacaatataactatattctggttgttggagaagctgaa
gccactagtgggcaggtgagtgttcgagtgagagacaaacctgatcatcaagccatgaca
gttgacgttctccttgctcacttcaaagatatggttgcatcatttcagtaa
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