Solanum stenotomum: 125841388
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Entry
125841388 CDS
T08385
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125841388
03012 Translation factors [BR:
sstn03012
]
125841388
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125841388
mRNA cycle factors
Stress granule specific factors
125841388
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-4
125841388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
125841388
NCBI-ProteinID:
XP_049376459
LinkDB
All DBs
Position
10:51657809..51667972
Genome browser
AA seq
1626 aa
AA seq
DB search
MQRRGDQKKSESQNQYKKSSRVGGRSPSAQPQYQRVTSGKGGGSSVLPPPSPDSDSSSPT
TQSFKKSDGETGPLKVTDAVQNDAPARTSGSDKLVEPADRIRHEDNQIVSSALSSQHTSS
DLDPSAPKTPIKDDTSKNVSLQFGSFTPGFVNGMQIPQRTNSAPPNMDEQKRIQARSSPF
RPLQLLPSSTPHQPQLREDIGKPMNKNPDPQHHERDLPVHVQVPAALAVGSMHKLSSLPF
PGVPVNPPFLQPHGPVQFGMPGPQVQHQGIPCSSFPMPMPMPLPVGNPNQVRHPPFVPGL
QPHPMQLQGAMQHGQMMNFPSKFGHQLSTPFGNMGVGIPSQFGQHVRKVNSRKSVKITHP
DTHEELKLDEKIDMKLDGGSSGLAIHHPGGLPSQSMHYGPSHPMSFSPQMSPNPMFLQNA
PSVPITNSLVAPCAPGLGYNSSVQLAINQAPGSVRREVLASSYPVSMKTAETEKALQPPL
RVNFSEEGSRILSETSVEASESASKPTPFASPSSKSLISVDIPPSGSATSIGSNVNHVRG
VDYVETELKNPPKKSQLHPQQLREEGNSVSKSNPTPTNSADRISEGQNAVTIETQAAVKE
TQIERNSNDRNASDQVSSTGGCETNNVVHQLSHSAASLSDSNVSKIVVPIATNNNKEVLP
SASGAKYNEDSHIHTSPSSPSYTKIRGKVSEETKTEYRRVQGSSPKDKHTNKVKSANSRG
KKKRREILQKADAAGDTSDLYMAFKGPKEKLQSSVSSGSVESCSSLTARKISSSSNEDFS
ANEDKKSTGEPNSWEDAAMSTPKLETSGDNKIVNDNLRHPNGGSDTTGQMRYSRDFLLTL
SSHFGDLPANFEVPWHMAEALLSPNSSISKGVDFNKNGPNSCPGQINSRQGSSSWSENRP
TGMADDGRWTNEQHIDINQGGNVNGARPGRGNHKNMRNLQGQPPSQYVSVFPAGAMLPLA
SQGGIQHIRSDANRWQRVSGSRKGSFPSHSPLQVMHKADKKYEIRKVTDAEEAKRRHLKA
ILNKLTPQNFEKLFEQVKEVNIDSATTLAGVISQIFDKALMEPTFCEMYANFCYHLAGEL
PDFVEDNQKITFKRLLLDKCQEEFERGEREEAEADSLEEDGAVKLSERKREEMRLQTRRR
MLGNIRLIGELYKKKMLTERIMHECIQKLLGQYQTPDEEDIESLCKLMSTIGGMIDHSKA
KDYMDAYFDMMTTMANNTDLSTRVRFMLMDIIDLRKNKWQQRRKVEGPKKIEEVRRDAVQ
ERRAQVGRSPRGSCTVSSARRGQPADLSPRPSMFSSPAPQMTPFHGIPSQNRGVGSQDCR
LEAKHPHESRTSSAAMPQRSIDDNKTMSLGPRGGPGRGTPFRGQAMHSAGPVTAGAGGWS
PYNSRQESISKYAPGTVVKPTANYARPNQHEHAHYAEKELTNTNRPFGRSAEPPASNSPG
TIWSEERLGEMSIAAICEFYSAVDEDEVVLRIGELNSPSFHPMMLSIWVNDSFQRKERDR
DLLARLLISLTKSKVVLETKHLIKGFESVLATLEDEATDAPKAAVFLGHIFGRLISENVI
SLKEAGYLIQHGGEESGHLLQTGLGYEVLESTFDLIRSEKGESALKDICNASSTQLEDFR
PPVLSK
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcaggggtgatcagaagaaaagtgaatcacagaatcagtataagaaaagtagt
agagttggtggtcgttcaccatcagcacagccgcagtatcaacgggttacttctggaaaa
ggcggtggtagctctgttctacctcctccttctcccgattccgattcctcttctcccacc
acgcaaagcttcaagaagtctgatggcgaaacaggtccactgaaagtgactgatgctgtg
caaaatgatgcccctgccagaacctcaggatcagataagttagttgagccagcagataga
atcagacatgaagataaccaaattgtttctagtgctctttcttctcaacatacatcttca
gatttggatccatcagctcccaagacccccatcaaagatgacacttctaaaaatgtatct
cttcaatttggaagctttaccccgggttttgtgaatggaatgcagattcctcaaaggacc
aactcagcaccccccaacatggatgagcagaagcgcattcaggcacgatctagtcctttt
agaccactgcagcttttgccttcttctactccacatcagccgcagctaagagaggacatt
gggaagccgatgaataaaaatcccgatcctcagcatcatgaaagagatctacctgttcat
gttcaggttccagcagctctggctgtcggtagcatgcacaagttatcttctctccctttt
ccgggggttccagtcaatcctccttttctgcagcctcatggtcctgtgcagttcggaatg
cctggaccacaggttcaacatcaaggaataccttgttcttcgttcccaatgccaatgcca
atgccactcccagttggaaatcccaaccaagttaggcatcccccatttgtccctggtctc
caacctcaccctatgcagcttcagggagcaatgcaacatggacaaatgatgaacttccct
tctaaatttggtcatcagctgagcactccatttggcaacatgggagttgggattccatca
cagtttgggcagcatgttaggaaggttaattctcgcaaatctgttaaaattactcatccc
gacactcatgaagagttgaaactagatgagaagattgacatgaaattggatggtggttca
tctggcttggcaatacatcatcctgggggcttaccatcacagtctatgcattatggtccc
tctcaccctatgagcttttccccacagatgtccccgaatcctatgttcttacaaaacgct
ccttcagttcctataacaaactcccttgtggctccctgcgctcccggactaggatataac
tcttcagttcaattggcaattaaccaagctcctggctctgttagaagagaggttttggcg
tcttcatatccagtttccatgaagacagcagaaacagaaaaggcactgcaaccacctttg
agagttaactttagtgaagagggatcaaggattctctcagaaacctctgttgaggcgtca
gaatctgcctccaagccaacaccttttgcttcaccctcaagcaaatcacttatttctgtc
gatatacctccttctggtagtgctacatctataggaagcaatgttaaccatgttcgagga
gtcgattatgttgagaccgagttgaagaaccctccaaagaaaagccaattgcatcctcaa
caactccgagaggaaggaaattccgtgtccaaatcgaatcctactccaacaaattcagca
gaccgtatttctgaaggtcaaaatgctgtaactatagaaacccaagcagcagtgaaagaa
actcaaattgaaagaaactcaaatgataggaatgcatcggatcaagtatcaagcacaggg
ggctgtgaaactaacaatgtggttcatcagttgtcacattctgctgcttccttatcagat
tccaatgtttctaaaattgtggtgcctattgctacaaataataataaagaagttttgcct
tctgcatctggagcaaagtataatgaggattctcatattcatacttcaccgtcatctcca
tcatataccaaaattaggggaaaagtctctgaggaaacaaaaactgaatatcgtcgtgtt
caaggatcaagtccaaaggataaacatacaaataaggtgaaaagtgcaaactccagggga
aagaaaaagagaagagaaattcttcagaaagctgatgcagctggagatacgtctgatctt
tatatggcatttaagggacccaaggagaaactacaatcttctgtttcttcaggaagtgtt
gagagttgttccagtctcactgcaaggaagatatcatcaagttccaatgaagatttttcg
gcaaatgaagataaaaagagtacaggtgaaccaaacagctgggaagatgctgctatgtca
actccaaagttggaaacttctggtgacaataaaattgttaatgataatcttaggcatcca
aatggtggaagtgatactacaggacaaatgagatactcaagagatttccttcttaccctt
tcttctcatttcggtgatctccctgctaattttgaagttccgtggcatatggcggaggcc
cttttgagtcctaactctagcatttcgaaaggggtagattttaacaagaatggtccaaac
tcctgtcctggacaaattaatagcagacaaggcagctcttcttggtctgagaaccgtcct
actggaatggcagatgatggcaggtggaccaatgagcaacatattgatatcaaccaaggg
ggaaatgttaatggtgctcgtccgggtcgaggaaaccacaagaatatgaggaatctacaa
ggacagccacctagccaatatgtatctgtgtttcctgctggagcaatgctgccattagcc
tctcagggaggaatacaacatattcggtccgatgccaaccgctggcagcgggtttctggc
tcccgaaaaggttcatttccttctcactctccactgcaagttatgcacaaagctgacaag
aaatatgagatacgcaaagtgactgatgcagaagaggcaaaacgtagacacttgaaagct
atcctcaacaagctaacgccacaaaattttgagaagctgtttgagcaagtaaaggaggtt
aatattgatagtgctaccactcttgctggtgtcatttcgcagatatttgacaaagctcta
atggagccaacattttgtgagatgtatgcaaatttttgttatcatctagccggggaactt
cctgattttgtggaggacaatcagaaaataaccttcaagagactgctccttgataaatgc
caggaggagtttgagagaggtgaaagagaagaagcagaagccgacagtttggaagaggat
ggagcggtaaagctgtcagagcgaaagagagaggagatgaggttacaaacacgaagaagg
atgttaggtaacatcagattgattggagaattatacaagaagaagatgcttacagagagg
ataatgcatgagtgcatccagaaattgctggggcagtaccagactccagatgaggaagat
attgagtctctctgcaagcttatgagcactataggaggaatgatcgaccattccaaggca
aaggattacatggacgcgtattttgatatgatgacgacaatggctaacaatacagatttg
tctactagggtgaggtttatgttgatggatattattgatttgagaaaaaataagtggcag
caaagaagaaaagtagaaggccctaaaaaaatagaggaagtgcgaagagatgctgtgcaa
gaacgtcgagctcaggttggtcggtcccctcgtggttcatgcactgtttcctctgctaga
agagggcagcctgcagatttaagtcctcgtccatccatgttttcttctccagctcctcag
atgactccatttcatggaataccatcacaaaatcgtggagttggaagccaggattgcagg
ttagaagctaaacatccacatgagagtaggacatcatcagctgccatgccacagcgatct
attgatgataataaaacaatgagccttggtccacggggaggccccggaaggggaacgcct
ttcaggggtcaagcaatgcattctgctggtcccgtgactgctggtgcaggtgggtggtca
ccatacaactcaagacaagaatcaatatccaaatatgctccagggacagttgtgaagcct
actgctaattatgctcggccaaaccaacatgagcacgcacattatgcagaaaaagaatta
acaaatacaaatcgtccttttgggagatctgccgaaccaccagcgtcaaattcaccagga
acgatatggtctgaagaacgtcttggagaaatgtcgattgcagctatttgtgaattttac
agtgcagttgatgaggacgaagttgttctacgcattggagaattgaactcaccaagcttt
catccaatgatgctatcaatatgggtaaatgactcatttcagaggaaagaaagggacagg
gatcttcttgctcggcttcttatcagtcttacgaagtcaaaggtggtactggaaaccaaa
catctcattaaggggtttgaatcagttttagctactttggaggacgaagctactgatgct
ccaaaagcagctgtatttcttggtcacattttcggtagattaatcagtgaaaatgtgatc
tctctgaaagaagcaggatatcttatacaacatggtggcgaggaatctggtcatcttctg
caaactggattgggatacgaagttcttgaaagtacatttgaccttataagatcagagaag
ggagaatcagccttgaaagatatctgcaatgcgtccagcacacagttggaagattttaga
ccacctgttctgtccaaatga
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integrated database retrieval system
