Solanum stenotomum: 125841419
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Entry
125841419 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22A-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125841419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125841419
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125841419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
125841419
NCBI-ProteinID:
XP_049376498
LinkDB
All DBs
Position
10:2860517..2864778
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AA seq
226 aa
AA seq
DB search
MSTAFKPIPNPVIHISNISPFHSGGLGFFSLAVFTRVSGYYSEMSRVYVGNLDPRVTERE
LEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDLDGKNGWRVELSHNSRGERG
GGRGGGRGRSGGSDLKCYECGESGHFARECRVRGGPGPGKRRSRSPPRYRRSPSYGRRSY
SPRGRSPRRRSVSPRGRSYSRSPYRGRDEVPYSNGNGVRDRIRSRS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagctttcaagcccattccaaatccagttattcatatctctaacatttcccct
tttcatagtggtggcctagggtttttctctctcgcggtattcactagggtttcaggttat
tattccgagatgtcaagagtgtatgttggaaatcttgatcctagggtcactgaaagagaa
ctagaagatgaattccgtgtctttggagttataagaagtgtttgggttgcaagacgccca
cctggttatgcttttattgactttgatgaccgtagagatgcacaagacgcaatcagggat
ctggatggtaaaaatggatggagagtggagctctcacataattctagaggagaaaggggt
gggggccgtggaggaggtcgtggtcgttctggaggctctgatttgaagtgctatgagtgt
ggtgagtctggtcattttgctcgtgaatgcagagtgcgaggaggtccaggtcctggtaaa
cgtagaagtcgtagccctcctagatatcggaggagcccaagttatggtcgcaggagttat
agtcctcgtggacgttcccccagacgccgaagcgtgtcacctcgtggccgtagttatagc
cgatctccataccgtggaagagatgaagttccttattccaatggaaatggtgtcagggac
cgaatcagaagcaggagctga
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