Solanum stenotomum: 125841447
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Entry
125841447 CDS
T08385
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125841447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125841447
03051 Proteasome [BR:
sstn03051
]
125841447
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125841447
Proteasome [BR:
sstn03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
125841447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR
Motif
Other DBs
NCBI-GeneID:
125841447
NCBI-ProteinID:
XP_049376539
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All DBs
Position
10:259234..263157
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AA seq
647 aa
AA seq
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MSSTAMDIHPPPPPPCWSNIVKQQPPPRPPPQLTTTPATVTAAVAAATAAKVGNGVLVGS
CKSTKGIAVAVVDANAIIQGGDKLNHSADRFFTVPEVLAEIRDRNSRHSLNLLPFTIDTT
EPSPDSLKKVISFARGTGDLHTLSDVDLKLIALTYTLHAQFHGTQHLRDCPPAIHMINVK
RLPEKDLPGWGANISNPEEWEAIEHALDDGADTTSRILPLKDLSLNVIPLDQQSGRDGSV
VNGVDSHSENQMDANDGFSKPQKYLPQKKEVKINGKKMVADGIDASQGQYDDHGDDWLPA
VSRSTHRRFLRRKARREMSETSSKMDDLQDATENTVDENLENCQCDDISMNQIPEENPEA
NAEDGNVSEVRDGEEKLSMILSQMRLEEDSAKALQDDADVNISNEGPESNDANQDGKEFE
EDEGEDFVCADGGAEDAEMSSQMDESVETSFVDDNSSEQSWMLKSLSESSVACVTADYAM
QNVILQVGLRLVAPGGMQIRELHRWVLKCHACYKVTTDVTKIFCPNCGNGGTLRKVAVTV
GENGIVIAARRPRISLRGTKFSLPLPQGGRGAVTKNPVLREDQLPQKYLYPKTKKKNKGD
DNIFTPDTIFLNHTSKKAPLQPPVRKALAVFSGKRNPNDNHYSRAKH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagctctacagccatggatatccacccccctcctccaccaccatgttggagcaacata
gtgaagcaacaaccgccgccacggccaccgccgcaacttactactactccggccaccgtc
accgccgccgtagctgcagcaacagcggcgaaggtaggtaatggagttttggtagggagc
tgcaagtcgacgaaggggatagcagtggctgtggtagatgcaaacgctataattcaaggc
ggagataagctgaatcattctgctgaccggttttttacggtacctgaagtgcttgcggag
attcgtgaccggaactcccgtcattcactcaatttacttccgttcactattgataccacg
gagccttcccctgattctcttaaaaaagttattagctttgcaaggggtactggtgatttg
cacacactttctgatgtggatctcaagctcattgctttaacttacacattgcacgctcaa
tttcatggaacccagcatctccgagattgccctccagctattcacatgattaatgtaaaa
aggttgccagagaaggacttgcctggatggggcgctaacatctctaatccggaagaatgg
gaagcaatagaacatgcacttgatgatggagcagacactacctctagaattcttcccttg
aaagatttgagcttgaatgttattcctcttgatcaacaaagtggtagagatggttctgtc
gtgaatggtgttgattctcattctgagaatcagatggatgccaacgatggcttcagtaaa
cctcaaaagtacttgccacagaaaaaagaggtgaagattaatggtaagaagatggttgct
gatggaattgatgcatcacagggacaatatgatgatcatggtgatgattggctacctgct
gtgagcagaagtactcataggagatttctcagacgaaaagctaggcgtgaaatgtctgaa
acatcatctaaaatggatgatttacaagatgctactgaaaatacagtagatgaaaacctc
gaaaactgtcaatgcgatgatatctctatgaaccaaatccctgaagaaaatcccgaggcg
aatgccgaggatggtaatgtttctgaagtaagagacggtgaagaaaaattgtctatgatt
ttgagtcagatgcggcttgaagaagattctgctaaagctcttcaagatgatgcagatgta
aacatttccaatgaggggcctgaatcaaatgatgctaatcaagacggtaaagaatttgaa
gaagatgaaggggaggatttcgtctgtgctgatggaggagcggaagatgcagagatgtcc
agccagatggatgagagcgttgagacatcgtttgtggatgataacagcagtgaacaaagt
tggatgttaaaatctttgtccgagtcaagtgtggcctgtgtgacagctgattatgcaatg
caaaatgttattcttcaagtcggtttacgccttgtggcacctggaggaatgcagatccgt
gagctgcacaggtgggtactgaaatgccatgcctgctataaagtgacaacagatgttacc
aagattttctgtcccaattgtggaaatgggggaactttacgcaaggtagcagtgactgtt
ggcgaaaatggcattgtgattgcagcacgcagaccacgtatatccttgcgagggacaaag
ttctccctgcctttacctcaagggggtagaggtgctgttaccaagaacccagtattacgc
gaggaccagcttccgcagaagtatctttatcctaaaacaaagaagaagaacaagggggat
gacaacatatttactccggacactatttttctcaaccatactagtaagaaggctcctctg
cagccccctgttcgcaaggcactagctgttttcagcgggaagaggaatcctaacgacaat
cattattctcgcgctaagcattag
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