Solanum stenotomum: 125841512
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Entry
125841512 CDS
T08385
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125841512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125841512
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125841512
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125841512
NCBI-ProteinID:
XP_049376622
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Position
10:complement(53111936..53116374)
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AA seq
483 aa
AA seq
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MATLADSFLADLDELSDNEADVIDEENLDVDQMEEDGDLADIEALNYDDLDNVSKLQKSH
RYIDIMQKVEDALEKESDVTNKGVVLEDEPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKRKNLAGFSTATSQFHVGYIEQTELFQSTPPSLRMRACRLLAAKST
LAARVDSINGDPVGKTGRSLREEIRKKIEKWQEPPPAKQPRPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSDTGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggacgagttgtccgataatgaagct
gatgttattgatgaggagaatcttgatgttgatcagatggaggaagatggagacttggca
gacattgaagcacttaattatgatgatctggataatgtttccaagctacaaaaatcacat
cggtacattgacataatgcagaaagttgaagatgcacttgagaaggagtctgatgtcacg
aataaaggtgttgttcttgaagatgaaccagagtatcagttgatagtagattgtaatgcc
ttatcagttgacattgagaatgaaatcgttataatccataacttcatacgtgacaagtat
cgattgaaatttcctgagttagagtcacttgttcatcacccgattgattatgctcgggtt
gttaaaaaaattggaaatgaaatagatctgactcttgttgacttggaaggactcctaccc
tcagctattatcatggttgtctctgttacggcatcaactaccagtggcaagccattgcca
gaagatgttttacagaagacggtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttcttgattttgttgagagtcgaatggggtatattgctcccaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcatcg
ttggcaaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaggaagaatttagca
gggttctccacagcaacatcccaatttcatgtgggttatattgagcaaacagaattattt
cagagtacacctccttccttaaggatgcgagcctgtagactgctggcagcaaaatctact
ttagctgcacgtgttgactcgatcaatggagacccggttggaaaaactggaagatctctt
agggaagagattcgtaaaaagatagagaagtggcaagagccacctcctgcaaagcagcca
aggcctcttccagttcctgattccgagcctaagaaaaagagaggtggccgtcggctgagg
aagatgaaagaaagatatgctatcacagacatgcggaaactagcaaataggatgcagttt
ggaatacctgaagaaagctccttaggggatggactaggagagggctatgggatgcttggt
caagctggaagtggtaaattgcgtgtatcagttggtcagagcaagcttgctgccaaagta
gcaaagaaattcaaggagaagagttatggaagcagtggtgctacatcaggcttgacttca
agtttggcctttactcctgtgcaaggaatcgagctatcaaatcctcaggcgcttgcaaat
cagcttggcagtggaacccagagcacctatttctcggatactggaacgttttctaagatt
aagagaacatga
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