Solanum stenotomum: 125841571
Help
Entry
125841571 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125841571
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125841571
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125841571
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125841571
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125841571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
MARCKS
Motif
Other DBs
NCBI-GeneID:
125841571
NCBI-ProteinID:
XP_049376681
LinkDB
All DBs
Position
10:752468..761441
Genome browser
AA seq
612 aa
AA seq
DB search
MAVVKVKNFGRSSSSSSFDLDSPVSLSISPLVNLSPKNSQPKSPELLAVRTAPLPQYPSI
SSSLLENFVPIMVINGNLIHHLRLVHHPRRDIQAENSSVSVPPPLPPLLISISACVQSPP
PPFKNWPIEKNEQSKVGLSSDTYENNEETPKPKLKTLHWDKFLLFSYFSMKKINTENGQT
SPDHDALKSQEIGKNNVDFSLVKIEVEEESKEKDSSLNEWSPVRVESNSLIISVDSNSMG
YIVSSASNELSYSGWAEWSPLTIVPISSIEPGKFQRDDHTVGFCVVCMIRDLVDLSMAGA
FDYVSPKKIVSHLRDFSPDFDWYQQEDAHEFLQCFLNKLEYCCYNLEPQDNIVKEAFGDR
FVSKLRCCNYDHFSVTHEPLIDISLEIEDIDNVLAALESFTKIKKIEFSCEKCKTQGPFE
KQLIVDRAPSVVALHLKRFKNNGIFVQKVDKHVSFPLELDMLLYTNKINNEEMKYDLYAI
IVHSGPSISSGHYYSFIRCAPNEWYKFNDEQVVFVEEDFVLAQEAYIMFYARSGTPWFSD
YIQIHRAFVNLIIPTTSTCIPNNHAFDVGEFNNVADDTNMKHELNKIEEDDSPGLPYVMA
SSSNNKMSNLNS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgttaaggtgaagaattttggtagatcgagctcatcttccagtttcgatttg
gattcgccagtatcgctaagcatttctccactggttaatttgagtccaaaaaattcacaa
cccaagtcaccagaactacttgctgttcgtactgctcctctacctcaatatccctctatt
tcgtcttcactgctagaaaattttgtaccgataatggtcattaacggaaatcttattcac
catctccgcctagtgcatcatccccggagagatattcaagcagaaaattcatcagtttca
gttccaccaccactaccgcctcttttgattagtatttcggcttgtgtacagtctccacca
ccaccatttaaaaattggcccattgagaagaatgagcagagtaaagtaggcttatcaagt
gatacttatgaaaacaacgaggaaactccaaaaccaaagttgaagactttgcattgggat
aagtttttgttgttttcttacttctcaatgaaaaaaataaatacagaaaatggacaaaca
tcacctgatcacgatgctttgaaatcccaagagattgggaaaaacaatgttgatttttca
ttagtaaaaattgaagttgaagaagaatcaaaagaaaaagattcaagtttgaatgaatgg
tcacctgttcgggttgaatccaattcattgatcattagtgttgattctaattcaatgggc
tatattgtttcttctgctagtaatgagctttcatattcgggttgggctgaatggtctcct
ttaacaattgtacctatttcttcaattgagcccggaaaatttcaaagagacgatcacaca
gtcggattttgtgtagtttgcatgattcgagatctagttgacctttctatggctggtgcc
tttgattatgtctcgccgaaaaaaattgttagccacttgagagatttttcacccgatttc
gactggtatcaacaagaagatgcacatgaattcttacagtgctttctcaataaactcgaa
tattgttgttacaatctagaaccacaagacaacattgtgaaggaggcctttggtgatcgt
tttgtaagcaagctccgttgttgcaattatgatcatttctctgtcacacacgagccttta
atcgacataagcttagagattgaggacattgacaatgtactagcagcactagagtctttc
actaaaataaaaaaaattgagttttcttgtgaaaagtgcaagacacaagggccatttgag
aagcagctcatcgttgatcgtgccccttctgttgttgccctacatttgaagagattcaaa
aataacggaatatttgttcagaaggtggacaagcatgtttcatttcctctggaattggac
atgcttctttataccaacaaaatcaataatgaagaaatgaaatatgatctctacgcaatt
atagtgcattccggaccttcaatatcttcaggacattattacagctttattcgttgtgct
ccaaatgaatggtacaaatttaatgacgagcaggttgtttttgttgaagaagattttgtt
ttagcacaagaggcctatattatgttttatgcaaggagcggcactccatggttttcagat
tatatccaaatccatagggccttcgtaaatctgattatccccacaacttctacgtgcatt
ccaaataatcatgctttcgatgttggtgaattcaataatgttgcagatgatacaaatatg
aagcatgaactcaacaagattgaggaggatgattcccctggtttaccttatgtaatggct
agtagcagcaacaacaagatgagtaatttgaactcatag
DBGET
integrated database retrieval system
