Solanum stenotomum: 125841993
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Entry
125841993 CDS
T08385
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125841993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125841993
03036 Chromosome and associated proteins [BR:
sstn03036
]
125841993
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125841993
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125841993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
125841993
NCBI-ProteinID:
XP_049377138
LinkDB
All DBs
Position
10:complement(39797803..39823700)
Genome browser
AA seq
719 aa
AA seq
DB search
MPGLTSESDDLAMVPVSPESEKQPVVIYPLRHGLKSPIHRLSFSWACGNTLRVSVFRKPP
SEKADGDGEAGGRVVEVKLSNSGDEEVDAARWRRMAYSSVTPFALLQSRKHSLSAASRMS
LDIPPYKAEWWEHVIEYSKEISSLLSDRKPPPKSIIEDPKSVVNEIAAPMCLKAAWELLE
IFYVDKQSQFWIPERLLDWFADHNSLFSGTLPTIHSKLVDFQQELVGVQVVEEDPNYWDA
MSSALAVGWLETVVKLLRLHGSYRFDQLSSRETENGLVEAVAVLISKMPRMRPSLREDNL
GECYKTKPDFMKAWEKWRTQISKLDCSSYWLQCDHRQTREGLKNLIQIMLGNPTVLSNAT
FNWMELFISHFLYIRPFTAGLESMHNSAQKCMQVKPVSISHKLFGLILGILGENTEVVLA
ECSRSFGPWMMAHAVELLTAGSTHAEILLHEEHSKLGGVSIEELHRLVYAQVLSSHALTW
QIAPIYLTSCIKQGIGLLENLLYKQPVQHSQILLKSIEICRLYELDTINSNIMRIAGVHH
WKHGRKGSGVFWLQQARDEFRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAG
GLEFLNKYRDFRRSLLQVHGDTPTDAARNAAEALVSLMKNPSTPQRFWLPLLYDSLKLLM
WQERPLVNVSQTQLLLNKLQELSMARLRPDFVEADLPSDALSSVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccagggctgacgtcagaatccgatgaccttgcaatggttccagtctcgccggagtcg
gaaaaacaacccgtggtcatctaccctctccgtcatggcctcaaatccccaattcatcga
ctctccttttcatgggcgtgtggcaatactctccgagtctcagttttccggaagcctccg
tcggagaaggcggacggagacggcgaggctggcggaagagtggtggaagtgaagcttagt
aacagcggagatgaggaagttgatgctgcaagatggaggagaatggcctacagttcagtg
actcctttcgctcttcttcagagccggaaacattctctgtctgcagcatccagaatgtcg
ttggatatccctccttacaaggcagagtggtgggagcatgtcatagagtacagcaaagag
ataagctctcttctcagtgatcgaaaaccgcctcctaaatcaattattgaagatcccaag
tcggtagtaaatgaaattgcagcgccaatgtgtctgaaagctgcgtgggagctattggag
atattttacgtagacaagcaatctcaattttggattcctgaacgattgctagattggttt
gctgaccacaattccttattctcgggaactctaccaactattcactcaaagcttgtggat
tttcagcaggaacttgttggagtacaggttgttgaagaagatccgaactactgggatgca
atgtcatcagcattggctgttggctggctggaaactgtggtaaaattgttgcgcttgcat
ggctcttaccggtttgatcaattatctagtcgagagacagagaacggactggtcgaagca
gttgctgttcttatatccaagatgcctagaatgcgtcctagtctgagagaagacaatttg
ggcgagtgttacaaaaccaagcccgacttcatgaaggcttgggagaagtggagaacacaa
ataagtaaactggactgcagttcctactggcttcaatgtgatcaccggcagaccagagaa
gggctgaaaaatttgatccagatcatgttgggaaatccgactgttctatcaaatgcaact
ttcaactggatggagctttttatatcccatttcttatacattaggccatttactgcgggt
ctagagagcatgcacaattcagctcagaagtgcatgcaagtaaagccagtttccatctcc
cataagctgtttggtcttatacttggaattcttggagaaaatactgaggttgttctagca
gagtgctcaagatcatttggcccctggatgatggcgcatgctgtagagttgttgacagct
gggagcactcatgcagaaattcttttgcatgaagaacattccaaacttgggggagttagc
atagaagagctgcatagacttgtatatgcgcaagttctgtcttctcatgcattaacatgg
caaattgcgccaatatacttgacttcatgcataaaacaaggaattggattattggagaat
ttgctgtacaagcagccagtacagcatagccaaattctgttaaagagtatagagatctgc
cgcctgtatgaacttgacactataaattcaaacattatgaggattgctggtgtgcatcac
tggaaacatgggagaaaaggctctggtgtcttctggctacagcaagctcgagatgaattt
cgtttaaacagaattgccaagcaattatttgatttcgtggggaagtcggtatctgatgaa
ggattcaagcaatgggaaggtctcatagagttgctgggttccgagtctagaactgctggt
ggacttgagtttctgaacaagtacagggactttaggagatccctactgcaggttcatggt
gatacacccactgatgctgctcgtaatgcagctgaagctctcgtctctctcatgaaaaat
ccttccacgccgcaacgcttttggttacctcttctatatgattcattgaaattgttaatg
tggcaggagcgaccgttggttaatgtttctcaaactcagcttctcttgaataaactgcaa
gaattgtccatggcaagattgaggccagactttgttgaagctgacttgccatctgatgcc
ttaagctctgtcaggctcgcacttgccactaacctgggtcgtgcaatccttgaagagtga
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