Solanum stenotomum: 125842180
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Entry
125842180 CDS
T08385
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sstn
Solanum stenotomum
Pathway
sstn03010
Ribosome
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125842180
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125842180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sstn03011
]
125842180
04121 Ubiquitin system [BR:
sstn04121
]
125842180
Ribosome [BR:
sstn03011
]
Ribosomal proteins
Eukaryotes
Large subunit
125842180
Archaea
125842180
Ubiquitin system [BR:
sstn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125842180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Plexin_RBD
Dsc3_N
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
125842180
NCBI-ProteinID:
XP_049377372
LinkDB
All DBs
Position
10:complement(5681265..5685962)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaaaactctgaccggtaaaacgattacgctggaagttgaatccagc
gataccatcgacaatgttaaagccaagatacaggacaaggaaggaattccaccagaccag
caaaggctgatttttgctggtaagcagcttgaggatggccgcaccttggctgactacaac
atccagaaagaatcaactttacatctggtgctgaggcttcgtggtggaatcattgagcca
tctttgatggctttggctaggaaatacaatcaggagaagatgatatgccgcaagtgctat
gctcggttgcatcctcgtgctgtcaactgccgcaagaagaagtgtggacacagcaaccag
ctgaggcctaagaagaagattaagtag
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integrated database retrieval system
