Solanum stenotomum: 125842220
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Entry
125842220 CDS
T08385
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125842220
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125842220
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
125842220
NCBI-ProteinID:
XP_049377421
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Position
10:complement(46078948..46083383)
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AA seq
462 aa
AA seq
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MVYSTVTDSSFPPAIQGSSAVAPPPPESFAVKSGVTGSVATEMVAVRPETAGESVAIVQK
WPGWPGDNVFRLVVPLAKVGGIIGRRGELVKRMCEETGASIRVLEGPLGNADRIVLISGR
ENPDAEVSPAMDAALRIFKRVAGLNNDDPGAGAAGAAFCFSRLLVASSQANHLIGRRGTT
IKSIQERSGAALRVLSADDVAPYATEDERIIEIHGEGLKVLDAFEAVVRLLRKFLVDHSM
IPVIEKMYNVNISQDQLAESWADKPQSSKFQPSGPATASHAVAVSGYSFSMSRDPYLLDC
ETAMDSELPRSTLPRYGQDPRLGGIHTTVAGRAGPIVTQITKVMQVPLGYAEDIIGVGGG
NIAYIRRTSRAALTVQESRVPEEITIEIKGTSSEVQAAEQLIQEFINNHKEPAPRMYGTR
EPEFGSFSRYGDPYSSSSSFPSQSFEGYGSSSLGAGYNRYRY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtgtactctactgtaactgattcatcatttccaccggccattcaaggctcatctgcg
gtggcgccgccgccgccggagtcgtttgctgtaaaatctggggttacaggttcggttgct
actgaaatggttgctgttagaccagagactgctggggaatcggttgcgattgtgcagaaa
tggccgggatggccgggggataacgtgttcaggctagttgtgccacttgcgaaagttggt
ggtataattgggcggaggggcgaacttgtaaagaggatgtgtgaagagactggcgccagc
attcgtgttctggaaggccctcttggcaatgctgatcgaatcgtcctaatatctggtaga
gaaaatccagatgctgaggtatctccagcaatggatgctgctttaagaattttcaagcgc
gttgccgggctaaacaatgatgatccaggagcaggagctgctggtgctgcattctgcttt
tcaaggttattggtggcttcatcacaagccaatcatttgattggtagacgtggtactacg
atcaaatcaatacaggaaagatcgggtgctgccctgagagtcttatctgcagatgatgtg
gccccttatgccactgaagatgaaagaattatcgaaattcatggagaaggtttgaaggtg
cttgatgcttttgaggcagtagttagactactgagaaagtttttggtcgatcatagtatg
atacctgtaattgaaaagatgtacaatgtaaatatctctcaagatcagctagcggagtcc
tgggctgataaaccacagtcctcaaagtttcagccttctggtcctgcaactgcatcccat
gctgtagcagtttctggttattccttctccatgagccgagacccttacttacttgattgt
gaaactgccatggactccgaactcccgcggtctacactaccgcgatatggacaggatcct
cgacttggcggcatacatactactgtggctggccgagctggtcctatagttacacagatc
acaaaggttatgcaagtaccgctggggtatgctgaggacatcattggtgttggtggtggt
aatatagcatatattcgccgcacaagtagggcagctcttactgtgcaagagagccgagta
cctgaagaaatcactatcgagattaagggtacctcgtcagaggttcaagcagctgaacag
cttattcaggagttcattaacaaccacaaagagccagccccaagaatgtatgggacgcgt
gagcctgagtttggttctttttcgcgttatggtgacccctattcttcatcatcttcgttt
ccatctcagagttttgaggggtatggatcttctagtttaggagcaggatacaacaggtat
agatactaa
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