Solanum stenotomum: 125842266
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Entry
125842266 CDS
T08385
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125842266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125842266
03036 Chromosome and associated proteins [BR:
sstn03036
]
125842266
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
125842266
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
125842266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Ge1_WD40
RMC1_N
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_RIG_1st
WDR54
Beta-prop_IFT80_2nd
KNTC1_N
Pep3_Vps18
PD40
Motif
Other DBs
NCBI-GeneID:
125842266
NCBI-ProteinID:
XP_049377489
LinkDB
All DBs
Position
10:1199766..1202714
Genome browser
AA seq
448 aa
AA seq
DB search
MDAGSRYNKFRPPLVNQMSHKKRTRENLDRFIPNRSAMDFDYAHYMLSGGKVKKEHYGVN
SPSKEAYSKQLAEIFNMNRTRILAFKNKPPHSTERVSESLSSIQQSKTIKKRRYIPQSSE
RTLDAPDILDDFYLNLLDWGSNNILAIALGNSVYLWDASDESATELLTVDDDFGPVTAVS
WSPDGRHLAVGLNNSHVQLWNTLQGSCRLLRTLRGHSLRVGSLDWNENILTTGGMDSMII
NNDVRVRSHIVGTYRGHNQEICGLKWSASGQQLASGGNDNLVHIWSISMGSANSTHQWVH
RMTDHTAAVKALSWCPFQSNLVASGGGIGDQCVKFWNTNTGSCLNSVNTGSQVCSLLWNR
HDRELLSSHGFTDNQLTVWKYPSMTKISELLGHTSRVLYMAQSPDGYTVATAAADETLRL
WNVFGNPKETMPVLKRKLEPFFDLAQIR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggagcagatacaataagtttcgacctcctctcgttaatcagatgtctcac
aagaaaagaactcgagagaatctggacaggtttatacccaatcgctctgcgatggatttt
gactatgcacattacatgctcagtggtgggaaggttaaaaaggaacactatggagtaaat
tctccatctaaagaagcttactcgaagcagttagcagaaattttcaacatgaatagaacg
aggatccttgcttttaagaataagcctccacattcgactgagagagtttctgaatctcta
tcatctatacaacagtcaaaaaccattaaaaagaggagatacattccccaatcttcggag
aggaccctggatgctcctgacatcctagatgatttttatctcaatttgttagactgggga
agcaataacatacttgccattgccttaggaaattctgtctatctgtgggatgcttctgat
gagtctgctactgagcttctcacggttgatgatgattttgggccggtgactgctgtcagc
tggtcaccagatggaagacaccttgcagtgggcttgaataattcgcacgttcagctgtgg
aacaccttgcaggggtcttgccgattgctgaggactttacgaggacacagcttaagggtt
ggctcacttgattggaatgaaaacatactgacaactgggggcatggacagtatgatcatc
aacaatgatgtgcgtgtaagatcccacatagttggaacatacaggggacacaatcaggag
atatgtggattgaagtggtctgcttcaggccagcaattggctagtggagggaatgacaat
ttggtccatatatggagcatatcgatggggtctgctaattctacacaccaatgggttcac
cgtatgacagatcacacagctgctgtaaaagctctttcctggtgtcctttccagagtaat
ctggtcgcctcaggtggtggcattggagatcaatgcgtaaagttttggaacaccaatacg
gggtcgtgcttgaactctgtcaatacaggttcacaagtctgttccttgctttggaacaga
catgatcgcgagcttttgagttctcacggctttactgacaaccagctcactgtttggaaa
tatccttctatgacgaaaatttcagaacttttgggtcacacatcaagagttctttatatg
gctcagagcccagatggctataccgtcgcaactgcagcagctgatgagacactaagatta
tggaatgtttttgggaatcctaaagagacaatgcctgtgctaaagagaaagctagagcca
ttttttgacttggctcagattagataa
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