KEGG   Solanum stenotomum: 125842353
Entry
125842353         CDS       T08385                                 
Name
(RefSeq) RING-H2 finger protein ATL54
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125842353
Enzymes [BR:sstn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125842353
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125842353
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 Prok-RING_1 zf-RING_16 zf-RING-like RIC3
Other DBs
NCBI-GeneID: 125842353
NCBI-ProteinID: XP_049377592
LinkDB
Position
1:complement(6285665..6287390)
AA seq 225 aa
MYVSVIKQLTVAMSFHFDRKLISESFDNSTSKTCSSYYCNPEVYRSIVCPLRCFNTCPRI
CLLPEFEPSPPNFTPKVTLPHSPNKHTVSIFLILLISVLGIAVYIFCAYAIHKFSNSRTS
SQPEQQVVGGGGEEELSDIQTVGLQQSVISAITIRKYKKGEGLIEGTECSVCLSEFQEDE
TLRILPKCNHAFHIPCIDTWLESHINCPMCRADIVITIPTTCSFH
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtacgtttctgtcattaaacaattaactgtagccatgtccttccattttgatcgaaag
ctgatctctgaatcttttgataattccaccagcaaaacttgtagcagctattattgcaac
ccagaggtgtatcgttctatagtttgtccgctgcgatgttttaatacttgcccgcgtatc
tgtctgcttccagaattcgaaccatcaccaccaaatttcacacctaaagttactcttccg
cattctccaaataaacacactgtttccatcttcttgatccttctaatttcagtcttaggc
attgccgtctacatattctgtgcctacgccatccacaaattcagcaactcaagaacttct
tcacaaccggagcaacaagtagtaggaggaggaggagaagaagagttaagtgatattcaa
acggtgggtcttcagcaatcagtcatcagcgccatcacaatccgcaagtataaaaaaggt
gaagggctaattgaaggaacagagtgctctgtttgcttgagtgagtttcaagaagatgaa
actcttaggattttgccaaagtgtaaccatgcttttcacataccttgcattgacacttgg
ctcgaatcacacatcaattgtcccatgtgccgtgccgacattgtcatcacaattcccacc
acttgcagctttcattga

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