Solanum stenotomum: 125842405
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Entry
125842405 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125842405
KO
K14841
ribosome biogenesis protein NSA1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125842405
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125842405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_NOL10_N
WD40_Prp19
EIF3I
Beta-prop_WDR3_2nd
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
PQQ_2
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125842405
NCBI-ProteinID:
XP_049377663
LinkDB
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Position
10:99674..109438
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AA seq
417 aa
AA seq
DB search
MPRTTTVESSGCPPLRALTFDILGLIKVVEAKGEQKEAPKVVETWGEPDASRCVLAASLV
DREFDPLLGVARKSGKIEVLSPVNGDVRASISIESQNHPGSADNSIVGLHLFKGERLGSS
SRSCNLLTCTSKGQANMTYVKMSKSLEDSGGESTQTTWNVCGSGSILCSKVDADESYALF
GGKGVEVNIWDLNQCAKVWSAKSPAKNSLGIFTPTWFTSATFLCKDDHRKFVAGTNSHQV
RLYDISAQRRPVVSFDFRETPIKAVAEDVDGHTIYIGNGSGDLASFDIRTGQLLGSFLGK
CSGSIRSIVKHPELPVIASCGLDSYLRIWDVKSRQLLSAVFLKQHLNSVVFDSKFSTREA
QVPPQQQDTDETLQTEEEEEEEKTVKRKKASKEHSGSKKLKTKKKSKRSKGDSNDIA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtactactactgtggagagctctggttgccctcctcttagagctttgacgttt
gacattcttggacttattaaagttgttgaagctaagggtgaacagaaggaagctccaaag
gtggtggagacatggggggaacctgatgcttcaaggtgtgtgcttgcggcgtcacttgtt
gaccgtgaatttgaccctctactaggtgtagcaaggaaaagcggcaagattgaggttctt
agtcctgtcaatggagatgttcgtgcatccatttcaattgaaagtcaaaatcatccagga
tcggctgataattctattgttggtttgcatttattcaaaggagaaagattgggctcatca
tcaaggtcatgcaacctgcttacatgcacaagcaaaggacaagcaaacatgacttatgtt
aaaatgtccaaatcacttgaagattctggtggtgaaagtactcaaacaacgtggaatgtt
tgtggttcaggcagtattttgtgctctaaggtagatgcagatgaaagctatgctctgttt
ggtgggaagggtgttgaggttaatatctgggatctgaaccagtgtgctaaagtttggtct
gcaaaatctccagccaaaaacagcctcggcatattcaccccaacttggtttacatctgca
actttcttatgcaaagatgatcaccgcaaatttgttgcaggcactaatagtcaccaggtg
cgtctttatgatatttctgctcagagaaggcctgttgtttcatttgattttcgtgagacc
cctattaaagctgtggctgaggatgtagatggacatacgatatacataggaaatgggtct
ggtgatcttgcttcttttgacatccgcacagggcaacttttgggatccttcttggggaaa
tgttcaggaagtataagatccatagttaagcatccagagcttccagttatagcttcatgt
ggattggacagctatttacgcatttgggatgtcaagtcacgacaacttctgtctgcggtt
ttcttgaagcagcatctcaacagtgttgtattcgattcaaaattctctacaagagaagct
caggtacctcctcagcaacaagatacagatgaaacattacagacggaagaagaggaagag
gaagagaagactgttaaacgcaagaaggcatcaaaagaacacagcggaagcaagaaactg
aagaccaagaaaaaaagtaaaaggtcgaaaggagacagtaacgacattgcctaa
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