Solanum stenotomum: 125842489
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Entry
125842489 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125842489
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125842489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125842489
Enzymes [BR:
sstn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
125842489
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
90S particles
Other 90S particles
125842489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
125842489
NCBI-ProteinID:
XP_049377746
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Position
10:complement(43824149..43829212)
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AA seq
278 aa
AA seq
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MVRAYKVKGEKRKKKGENYDKEEEIEVPLEEEESTKRVKTEHTVADTEAAERVVDLLSGI
PVVAADQTNKAGVIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNGRNPSDYRPDIAHQ
AMLSILDSRVNKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAV
GKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQDYVNGVNYDTNLVFVVGAMAHG
KIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWKIL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcgtacaaagtaaaaggggagaagagaaaaaagaaaggagagaattatgat
aaagaagaagaaattgaggtaccattggaagaggaggaatcaacaaaaagagtgaagaca
gaacacactgtggcagacacggaggcagctgaaagagttgtagatttactttctggcatt
cctgttgttgcagctgatcaaaccaataaagctggtgtaatttttatcattgaaagagct
tctcttgaaattgctaaaattggaaagacgtaccaacttctgaattctgatgaacactcc
aactttctgaagaagaatggtcggaacccttctgattatcggcctgatattgcgcatcag
gcaatgctttcaattttagatagccgagtaaataaagctgggcgactgaaagctttgtat
gtgaggactgagaaaggtgtcctttttgaagtaaaacctcatgttcgcatccctaggaca
tttaagagatttgctggcatcatgttgcagctgctacaaaagctgagcataactgctgtt
ggtaagcgagagaaactgttgcgtgttataaaaaaccctgttacacagtacctacccatc
gactgtcggaagataggcttctctcatagttctgagaagctggtggatattcaggactat
gttaatggcgtcaactatgacacgaaccttgtttttgtggttggggctatggcccatggg
aaaattgataaagattatgttgaagattatttgtcaatttcagattatccattgagtgct
gcatactgcatatcaatgatcacgaatgccatggagcgcaaatggaagattttgtag
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