Solanum stenotomum: 125842693
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Entry
125842693 CDS
T08385
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125842693
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125842693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
HEAT_2
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
125842693
NCBI-ProteinID:
XP_049377980
LinkDB
All DBs
Position
10:complement(46276336..46306618)
Genome browser
AA seq
2050 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRLTAARQIGEIAKSHPQDLNSLLSKVSQYLRSEKWD
TRVAAAHAIGSIAENVKHTTLAEHCSSVEVKMSEEGISGNVEELVAWPNCYPKIGGTSFR
SFDLNKVLEFGALLASAGQEYDIPTDNSKNSRERLARQKQNLRRRLGLDVCEQFMDVNEM
IRDEDLIMQRANSPGNGVAAQYYSSRPVGNIRHYVATMVPSVRSRRPSARELNLLKRKAK
INSKDQTKGWNKDGDTEAPQSQDIISPRGMCPDMSSSNKLLGENISDEDGLEYDGDKIWP
FQSFVEQLILDMFDPLWEVRHGSVMAMREILTHQGANAGVIIPDLTCDSTLNIKIKERVD
ENTVKRERPIDLNMQVLPDELESVSKKLKVEPEDAAYLPMDTMVCTSRDGDPGDVSVKVE
DVGLSLAVEQANGEVSIGSVKLETQSHLSGGSLGNDMSDEKGVGVDKTSMEKMGILENLP
ENCELMNLVRLARHSWLKNCEFLQDCAIRFLCVLSLERFGDYVSDQVVAPVRETCAQALG
AVLKYMHPTLVHETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLPELLGCVLPACK
AGLEDPDDDVRAVAADALLPTAGSVVALNGQLLHSIIMLLWDILLDLDDLSPSTSSVMNL
LAEIYSQEQMIPKTLGEKKKFDLNEIDRQDDLGEGTWSSGNPYMLSTLAPRLWPFMRHSI
TSVRYSAIRTLERLLEAEYKRSVAESSSSFWPTFILGDTLRIVFQNLLLESNEEIVQCSG
RVWRILLQCPVEDLEDASKAYFPSWLELATTPYGSSLDTAKMFWPVALPRKSHFKAAAKM
RAVKPENDSLKSICSDSGEGTTVLEKSGEASTSSGKIVVGADVDMSVTYTRVVTATVLGI
LASRLREGYLQFFVDPLWKALTSLSGVQRQVASMVLISWFKELKTRNVLDMDGVIAGISS
NFRSWLLDLLACTNPAFPTKDSLLPYIELSRTYDKMRNEARQLYHATESSEMLKDLLSST
PVDLDNLSADDAINFASKLQFSSINTKGEESVERNSLDELETFKQRLLTTSGYLKCVQNN
LHVTVSSLLAAAVVWMNELPVKLNPIILPLMASIKREQEEILQSKAAEALAELIYRCMGR
KPGPNDKLIKNLCCLTCMDPCETPQAGILNSIEIIEEQDLLSSGSSSQRHKSKVHMLSPG
EDRSKVEGFVSRRGSELALKFLCEKLGGSLFEKLPKLWDCLVEVLKPCSLEGMTAEDERL
LTQAIELVKDPQNLINNIQVVRSIAPMLDETLRPKLLTLLPCIFRCVRHSHIAVRLAASR
CITTMAKSMTLDVMGSVIENVVPMLGDITSVHSKQGAGMLVSLLVQGLGIELVPYAPLLV
VPLLRCMSDSDHSVRQSVTHSFATLVPLLPLARGVSPPVGLSEHLSRSQEDVKFLEQLID
NSHIDDYKLSTELKVTLRRYQQEGINWLAFLKRFNLHGILCDDMGLGKTLQASAIVASDL
AEHIALNSSQDLPPSLIICPSTLVGHWVYEIEKFIDGSLLTTLQYVGSAQERSSLRSQFN
QHNVIVTSYDVIRKDVDHLKQLFWNYCILDEGHIIKNSKSKITVAVKQLKAQHRLILSGT
PIQNNVLDLWSLFDFLMPGFLGTERQFHASYGKPLLAARDPKCSAKDAEAGVLAMEALHK
QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHVRQEISSMVKHNESD
ASQKNDLPKASSHVFQALQYLLKLCSHPLLVFGERVSESLSSVVSELFSPGSDIVSELHQ
LHHSPKLVALQEILSECGIGVDSGSEGTICVGQHRVLIFAQHKALLDIIERDLFQNHMKN
VTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPM
RDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINSENASLKTMNT
DQLLDLFTSAESKKGAGRSKRTDEKSDVDSILPRSGKGLKAILGGLEELWDQSQYTEEYN
LGQFLAKLNG
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaatcgtcacggcttaatcgcctacttactttattagacactggttca
actcaagcaacaagattgacagcagctaggcagattggtgaaatagccaaatcacatcct
caggacctgaactctttgttgagtaaggtttcacaatatcttaggagtgaaaagtgggac
accagagttgctgctgctcatgctattggatcaattgctgagaatgttaaacatacgact
ctggctgaacactgttcatctgtagaggtgaaaatgtctgaagaaggaatctcaggcaat
gttgaagaattggtagcttggcctaattgttatcctaaaataggagggacctctttcaga
agttttgacttgaacaaagtacttgagtttggggctctattggcatctgcaggacaggag
tatgatattcctacggacaatagcaagaattcaagggagcggttggcccgccagaaacaa
aacttgcgacggcgattgggattagatgtgtgtgaacagttcatggatgtcaatgaaatg
ataagggatgaggacctgatcatgcagagagctaattctccaggaaatggcgttgctgct
caatattattcatcgaggcctgttggcaatatccggcattatgttgcaactatggtacca
agtgtcagatctcggaggccaagtgcacgagaactaaatcttttgaagcggaaagcaaaa
ataaactcaaaggaccaaacaaaaggatggaacaaggatggagatacagaagctccacaa
tcacaagatataatttctcctaggggcatgtgtcctgacatgtcgagctctaataagcta
cttggtgaaaacatctccgatgaagatggtctagagtatgatggagataagatttggcca
tttcagagttttgttgagcaactcatccttgatatgtttgatcctttatgggaggttcgt
catggtagtgtcatggctatgagagagatcttaactcatcaaggggctaatgcgggagtt
atcattccagacttgacatgtgatagcacattaaatattaaaataaaagagagggtagac
gagaatactgtcaaaagggagagaccaattgatcttaatatgcaagttctacctgatgag
ttagagtcagtttccaagaaactgaaggttgaacctgaagatgcagcttatttgccaatg
gataccatggtctgtaccagcagggatggtgatcctggtgatgttagtgtaaaagtggaa
gatgttggattgagtttggctgttgaacaggcaaatggtgaagttagcattggttctgtt
aagttggagactcaatctcatcttagtggtggaagcctgggtaatgatatgtcagatgag
aaaggagttggcgtggataagacttcaatggaaaagatgggcattctagaaaaccttcct
gagaattgtgagctgatgaacttggttagattggctaggcattcttggctcaagaattgt
gaatttcttcaggattgcgctattcgtttcttatgtgtcttatcattggaacgttttgga
gactatgtatcggatcaagttgtggctcctgttcgtgagacttgtgcacaagctttgggt
gctgtgcttaagtacatgcatcctactctagttcatgagacactgaatatcttgctacag
atgcagcgtagaccggaatgggagattcgccatgggagtcttttggggatcaaataccta
gttgccgtgcggcaggaaatgcttcctgagttgcttggctgtgttctcccggcatgtaaa
gctgggcttgaagatcctgatgatgatgtgagagctgttgcagcagatgctttattaccc
actgcagggtctgttgttgcattaaatggtcagctgttgcattctataatcatgttgctt
tgggatattttgcttgacttggatgatctcagtccatctacaagcagtgtgatgaatctg
ttggcagagatctactctcaagagcaaatgattcccaaaactttaggggagaaaaagaaa
tttgatctcaatgaaattgatcgccaagatgaccttggggaagggacatggtcttcagga
aatccttacatgctatcaacattggcgccaagattatggccgttcatgagacatagtatc
acttcagtccgttactcagctatccggactcttgagcgattgcttgaagccgaatataag
aggagcgtcgctgagtcatctagctctttctggcctacatttattttgggtgatactctc
aggattgttttccagaatttgctgcttgaatcaaatgaggagattgtgcagtgctctggc
agggtttggaggatccttctccagtgcccagtggaagacttggaagatgcttcaaaggca
tattttccttcctggttggagttagcaactactccatatggttcatcattggatactgca
aaaatgttttggcctgtagcacttcctcgaaaaagtcacttcaaagcagctgcaaagatg
cgagctgtgaaaccagaaaacgattctcttaaaagcatatgctcagattcaggtgaaggc
actactgtgctggagaaaagtggagaggcttccaccagcagcggaaagattgtggtgggt
gctgatgtcgacatgtcggtcacatatacacgtgttgttactgccacagtcttgggcatt
ttagcttctaggttgcgtgaaggatatttgcaattttttgttgaccccttatggaaggcg
cttacctctctatctggagttcaacgacaggtagcttcaatggtgcttatttcttggttt
aaagaactgaagaccaggaacgttttggatatggatggggtcattgctggcatctcaagt
aattttaggagctggttgttggatttgctagcctgcactaatccagcttttcctacgaaa
gattctcttcttccttacattgaactctcaagaacatatgataaaatgcgcaacgaagct
cgtcaactgtaccatgcgactgagtcatctgaaatgcttaaagatttgttatcatctacc
ccggttgacttggataatctcagtgcagatgatgcaattaattttgcatctaaacttcaa
ttttcaagtattaatactaaaggggaggaatctgtcgagcggaacagtctagacgaacta
gaaacattcaaacagaggcttttgaccacttctgggtatttgaaatgtgtccagaataat
ttgcatgttactgtctcttctttactggctgctgctgttgtctggatgaatgaacttccc
gtgaaattgaatccaattatattacctttgatggcttctattaagagagaacaggaggag
atattacaaagtaaggcggctgaggctcttgcagagcttatctatcgttgtatgggacgg
aagcctggaccaaatgataagttaattaagaacctctgttgtttgacatgcatggatcct
tgtgagacacctcaagccggaattttgaattctatagaaataattgaagagcaagatctt
ctatcctcaggaagtagcagtcagagacataaatcaaaagttcatatgctctcccctggt
gaagaccgttcaaaggttgaggggttcgtcagtagacgtggatctgaacttgctttgaag
ttcttatgtgaaaaattgggtggatctttgtttgaaaagcttcctaagctgtgggactgc
ctagtggaagttcttaagccttgtagtcttgaaggcatgactgcagaagatgaaagactt
cttactcaagctattgagttggttaaggatcctcagaacttgattaacaatatccaggtg
gtccgttccattgcaccaatgctggatgagacattaagaccgaaactcctcactctcctt
ccatgcattttcagatgtgttcgtcattcacatattgctgtgagattagctgcatctaga
tgtattacaaccatggccaagtcaatgacattggatgtgatgggttcagttattgagaat
gtggtgcctatgttaggtgacattacatctgtacattctaaacaaggagctggcatgctt
gtcagtttgcttgtccagggacttggtatcgagctggttccatatgctcccctattagta
gttccccttctgaggtgtatgagtgattcagatcattctgtcagacagagtgtgacacat
agttttgccacccttgtgcctctacttccattagcacgtggtgtttctcctcctgttggt
cttagtgaacacctatcaagaagtcaagaagatgttaaatttttggagcagctaattgac
aactctcatatagatgattacaagctctcaactgaactaaaggtgacattgagaaggtac
caacaagaaggtataaattggttggcatttttgaagcgctttaatcttcacggcatttta
tgtgatgacatgggccttggtaagacccttcaagcatcagcaattgtggcatctgattta
gcagagcacattgctctaaatagttcccaggatctacctccatctttgataatatgccct
tcaacccttgttggccactgggtttatgaaatagagaagtttattgatggttctttgctt
accaccctccagtatgttggttctgcacaagaacgcagttctctacggtctcagtttaat
cagcataatgttattgtgacgtcatatgatgtaattcgcaaagatgttgatcatcttaaa
caactattttggaactattgcattctagatgagggacatatcataaagaattctaagtcg
aaaataacagttgctgttaaacaattgaaggcacaacaccgcctcattctcagtggaaca
ccaatacagaataatgtgttggatctgtggtcactctttgactttcttatgccagggttt
cttggaactgaaagacaattccatgcctcctacggtaaaccactactagctgcccgggat
cccaaatgttcagccaaggatgctgaagcaggtgtgctagctatggaagcattgcacaag
caggtgatgccttttctccttcgccggactaaagatgaagtcttatctgatctgccagag
aaaataattcaggataggtactgtgacctgagtcctgttcagctaaaactctatgaacaa
ttttctggttcacatgtaagacaagaaatttccagcatggtgaagcacaatgaatcagat
gcgagccaaaaaaatgatttaccaaaagcatcttctcatgtattccaggcacttcaatac
ttgcttaaactttgtagtcatcctctgctcgtgtttggggagagagtttcagaatctctc
tcatctgttgtgtcagagctcttctctcctggttctgacattgtttcagaactccatcaa
ctccaccactctcccaaactagttgccttgcaggagatcctttcagagtgtggaattggt
gttgattcaggttctgaaggcactatttgtgtgggacagcacagagtcctgatatttgca
cagcataaggccttgttggacatcattgagagagacctgtttcaaaatcatatgaagaat
gttacatacttgaggctggatgggtcagttgaaccagaaaagcgctttgacattgtgaaa
gccttcaattcggatcctactatagacgttttattgcttactacacatgttggtgggctt
ggtttgaacctgacatcagctgatacccttgtgttcatggagcatgactggaatccaatg
cgagatcaccaggctatggatcgagctcacaggttgggccagcgaaaagttgtaaatgtt
catcgtctcattatgcgaggaaccttggaagaaaaagtaatgagtctccaaaggttcaaa
gtgtctgtagccaatgcagtgatcaattcagagaacgcaagtttgaaaacgatgaataca
gaccagttacttgatctatttacttcggctgaaagcaaaaagggagctggtagatccaaa
agaactgatgaaaaatctgacgtggactcaatcttgccacgtagtgggaagggattgaaa
gccattctcggaggattggaggagctttgggatcagtcacaatacacagaggagtataac
ctgggccagttcttagcaaagcttaatggttaa
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integrated database retrieval system
