Solanum stenotomum: 125842714
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Entry
125842714 CDS
T08385
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125842714
Membrane trafficking [BR:
sstn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125842714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
125842714
NCBI-ProteinID:
XP_049377998
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All DBs
Position
10:complement(8682403..8736848)
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AA seq
1388 aa
AA seq
DB search
METSSSGYRFRRIPHHSFAGSLNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPTSFQSQIYEGPDTDIETEMHLANARRSKIEDSIDGEIPSTSGTQLSEDNFSDLSNA
KVSKHFGESPLPTYEPVFDWENERSLIFGQRIPEAHMSQYTSGLKIAVKVLSLSFQAGLV
EPFYGTICLYNRERREKLSEDFIFHVLPTEMQEASSSYERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFSWAIIPLFDSNIASVGG
SASPSSPLAPSVSASSSQEGITEPLSKITADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSTEVENALESGSLIYDSLDHGDHLNDSTSMKCPT
NGSFSKSKSSEMKELVRNGSVTHENVENTADDFEAFDFRTTTRNEPFLQLFHCLYVYPLT
VSMSRKRNMFIRVELRRDDTDIRKPSLEAMHPKEPGVPLQKWSHTQVAVGARVASYHDEI
KVSLPVIWTPSHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRSEISLPIMKEL
VPHYLQESGKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGS
ELLEAINSLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVD
EAERNAFLVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWF
FLELIVKSMALEQARSFYHNLPSGEDIPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLS
LAKHLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDL
FVEMPGRDPSDRNYLSSILIQEIFLTWDHDDLSMRAKAARILVVLMCKHEFDIRYQKLED
KLYIAQLYFPLVGQVRIYLQALVCRNDGVWSKDHVSALRKICPMVSSDITSEASAAEVEG
YGASKLTVDSAVKYLQLANKLFHQAELFHFCASILELVIPVNKSRKAYGQLAKCHTTLTN
IYESILEQESSPIPFTDATYYRVGFYGEKFGNLDRKEYVYREPRDVRLGDIMEKLSHIYE
SRMDGTTLHVIPDSRQVKADELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRA
RVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKCESLEFSPVEN
AIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGE
PATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHY
IPAILSEL
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcgatttcggagaataccacaccattccttcgctggt
tccttgaatttagatccactgcttgatgaaaatttggagcagtggccacatttaaatgaa
ctcgtgcaatgctacagaaccgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagcccgacttcatttcagagtcaaatatatgagggtcctgatactgatattgaa
acagaaatgcatcttgcaaatgctagacggtctaagattgaggattcaattgatggtgaa
atccccagcacttccgggacacaactctctgaagataatttctctgacctctcaaatgcc
aaagtctccaagcattttggtgaatcccctctaccgacttatgaaccagtttttgactgg
gaaaatgaaagatcattaatatttgggcaaaggattcctgaagctcatatgtcccagtat
acgagcggtctgaagattgctgtgaaagtcctatcattgtcatttcaagctggactagtt
gagccgttttatggcacaatttgtttatataatagggagcgaagagaaaaactttctgag
gattttattttccatgtattgcctaccgaaatgcaagaagcaagcagttcctatgaaagg
cgttgcatttttcatctagatgctccatcagcatctatttgtctgctaatccaactagaa
aaacctgccactgaagaaggtggagtgtctccttctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaaactacaagtatggtcacggatcatgccttacagg
gagtccttttcctgggccatcattccactctttgatagtaacatagcttctgtgggtggc
tctgcttctcccagcagccctcttgctcccagcgtctctgcttcaagttcacaagagggt
atcactgagccactttcaaaaattacagcagatggaaagcttggttattcaaatggaaac
tccatcgtcgttgaagtgtctaacttaaacaaagtcaaagaaggatacactgaggaatct
ctccaggatccaaagagaaaggttcataaaccagtaaaaggtgtcttgaaattggaaatc
gaaaaactgccagctagctctactgaagttgaaaatgctttggagagtggtagtttgatc
tatgattctcttgatcatggcgaccatttgaatgattcaacttctatgaaatgccctact
aatggttccttttccaagtctaaatcatctgagatgaaagagcttgttcggaatggttca
gttactcatgaaaatgtggaaaatactgctgatgattttgaagcttttgacttccgcaca
acgacaaggaatgaaccgttcttgcagctctttcactgcttatatgtctaccccttgact
gttagtatgagtcggaaacgaaacatgtttattcgtgttgaactgagaagggacgacaca
gatattcgaaaaccatctctagaggctatgcatccaaaggaaccaggtgtaccacttcag
aaatggtctcacacacaagttgctgtgggggcaagggtggccagctaccatgatgaaatc
aaagtttctttgcctgttatttggacaccatcacaccaccttttgtttactttctatcat
gttgatcttcagacaaaacttgaagcaccaaagccggtggtaattggatacgcttcactt
ccattatcgacacatgcacagttcagatctgagatatccttgccaatcatgaaagaattg
gttcctcattatcttcaagaaagtggcaaggaaaggctggattacttggaagatggaaag
aatatcttcaagcttcgtttacgactatgttcatcattatacccagttagtgagcgcatt
agggattttttcctcgagtatgataggcatactctacggacaagccccccttggggatct
gaacttcttgaggcaatcaatagtttgaagaatgttgattccactgctttgcttcaattt
ctttatccaatcttaaacatgcttctccatcttattggcaacgggggagaaactcttcag
gttgctgcctttagagctatggttaacattttaacaagggtgcagcaagagtcagttgat
gaagctgagagaaatgctttcctggtaaactttgttgattacgcttttgatgattttggc
ggccgccagccaccagtgtatcctggtttgtccacagtgtggggaagtttggctcgcagt
aaggcaaaagggtaccgcgttgggcctgtctatgatgatgtcttggcaatggcttggttt
tttcttgagttaattgtcaagtcaatggcactggagcaggctcgatccttctatcacaat
cttccatcaggtgaagatatcccgccaatgcaattgaaagaaggtgttttcagatgtgtt
gttcagttgtatgattgccttttaacagaagttcatgaacgctgcaagaaaggtctaagc
ctggccaagcatttaaatagtagtttggctttcttttgttatgatcttttatccatcatt
gagcctcgtcaggtttttgaactggtgtccttatatctcgataaattctctggagtgtgt
caaacggtgctgcatgactgcaagcttacctttctacaaattatatgcgatcacgatctt
tttgttgaaatgcctggacgagatccttctgataggaactatctttcatctatcttaatt
caagagattttccttacatgggatcatgatgacttgtcaatgagggcaaaagcggcaaga
atcttggtggtcctcatgtgtaagcacgagtttgatatccgctaccaaaagctagaggat
aaattatatattgctcaattatattttccccttgttggccaggttcgtatctatctccag
gcccttgtgtgtaggaatgatggtgtctggagcaaggatcacgtgagtgcattacgcaaa
atatgccccatggtcagcagtgacatcacttctgaggcttcagcagctgaggtggaggga
tatggtgcttcaaaactcacagttgactcggctgtgaagtatttacagcttgcaaataag
cttttccatcaggctgagttgttccatttctgtgcaagcattctagaacttgtaatccca
gtaaataaaagcaggaaggcatatggacagcttgcaaaatgccacacaacacttactaat
atctacgagtccatccttgagcaggaatcaagccctattcctttcacagacgccacatat
tatagagttggattttatggtgagaagtttgggaatctggacaggaaagaatatgtttat
agagagcctcgtgatgtgcgattaggtgacataatggagaaattgagccatatctatgag
tcgagaatggatggaactacattacacgtaattcctgattcaagacaggtcaaagcagat
gagttgcagcctggagtctgctacctgcaaataactgcagttgatccagtaatggaggat
gaagatttaggaagcagaagggaaaggatattctctctttctacaggaagtgtccgtgct
cgtgtctttgatcggtttttgtttgatacccctttcactaaaaatggaaagacccaagga
ggcttggaagaccaatggaagcggcgaacagttctgcaaactgagggatcttttcctgcg
ctagtgaatagactcttggttattaaatgtgaatcccttgagttctccccggttgagaac
gcaattggaatgattgaaactaggacagctgcattaaggaatgaacttgaagagcctaga
agctcagaaggcgatcaacttccccgtttgcagagtttacaaaggattcttcaaggttca
gttgcagttcaagttaacagtggagtcctcagcgtctgtacagctttcctttctggtgag
cctgcaactaggttgcgttcacaggagctacaacaacttattgctgcccttcttgaattt
atggctgtgtgcaaacgtgctattcgagtgcactttaggttgatcggggaagaagatcag
gatttccatactcagcttgtaaatgggttccagtctctcactgcagaactgtcacattat
attcctgcaattctttcagagctttag
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