Solanum stenotomum: 125843035
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Entry
125843035 CDS
T08385
Name
(RefSeq) transcription factor IIIB 60 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125843035
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125843035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
YozE_SAM_like
BRF2-like_C_cyclin_rpt
DUF1033
Motif
Other DBs
NCBI-GeneID:
125843035
NCBI-ProteinID:
XP_049378243
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Position
1:complement(19038350..19058278)
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AA seq
609 aa
AA seq
DB search
MVWCVNCAQDKPTKDVEGKICCSFCGKVLEEDNFSIEPTFVKNASGQSQLSGSRVSTIQS
NYSVSRERTLKEAYEGIEGMLYGLGIDGGDSIARPALSFYTIAVEKSFTRGRRKEQVQAA
CLYIACRENKKPFLLIDFSEYLRINVYVLGAVFLQLCKILHLEDHPIVQKPVDPSLFIHR
FTDRLFGGRKPNISRSALHILASMKRDWMQTGRKPSGLCGAALYIASLSHGLSCSKSEII
KVVHICEATLTKRLIEFENTESGSLTIDEFNTRAEELEKEETLALQLYSGSKGSGITEVL
CEHKKSVKLPFAHGLCESCYTDFVKLSGGLDGGSEPPSFQRAERERLMAKQDAEEIAEDP
SFPMSSQMENNVGEYLEPDKEGNTQSVKNVHISGSEQVGAFSVDKTDHIATPDTLHGMDG
IDHDESGNFSDIDDVEVDSYLHNEQEKKYKKIIWETMNREYLEEQAAKEAAVLEAKKQHE
FILANCPEDVQKFAAAAAASVAKSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSN
KINYDVLEKLFDDSLPENPKKARTAYDSTDDYGVKSDKFDPEVDENYENTFGEDVGGYGY
DQDYDLDDY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtgttaattgtgcacaggacaagccgactaaagatgtggagggtaaaata
tgttgttccttctgtggaaaagtacttgaagaagataatttttctattgagcccactttc
gtcaagaatgcttctggacagagccaattgtcaggaagcagggtgagcactatccaaagt
aattattcagtttcacgtgaaagaacactaaaagaagcatatgagggtatagagggtatg
ctttatgggctaggaattgatggtggtgattcaatagctcgtccagctttgtccttctat
acgatagcagttgaaaagagtttcacaagggggcgcaggaaagagcaagttcaagctgct
tgtctttacattgcatgtagggagaacaaaaagccattcctactcattgacttttctgag
tacttgaggataaatgtgtatgtattaggagctgtattcttacagctttgcaagattcta
caccttgaagaccacccaattgttcaaaaacctgtggatccgagcctgttcattcatcga
tttactgatcgtttatttgggggaaggaagccaaacatttctagatctgctcttcacatt
ttggctagcatgaagcgagattggatgcagacagggagaaagccaagtggattatgtgga
gctgcactgtacattgcttctctttcacatggactgagttgttctaaatcagaaattatc
aaagtggtgcacatttgcgaagcaacactgacaaagcgtttgattgaatttgagaacaca
gaatctgggagcttaacgattgatgagttcaatacaagagctgaggagcttgagaaagaa
gagacgctggccctgcaactttattcggggtcaaaaggatctgggatcacagaagtgctg
tgtgaacacaagaaaagcgtgaagctgccttttgcccatggcctttgtgaaagttgttat
actgattttgtaaaactttcaggtgggcttgatggaggatctgaacctccatccttccaa
cgtgctgagagggaaagattaatggcaaaacaagatgctgaagaaattgcggaggatcca
agttttcccatgtccagtcagatggagaacaatgtcggcgagtatttggagcctgataag
gaagggaacacccagagtgtgaaaaatgtgcatatatcaggatctgagcaagtaggagca
ttctcagtggataaaactgatcatattgcgactcctgatacattacatggcatggatggt
attgatcatgatgaatcaggaaacttttccgatatcgatgatgtagaggttgacagttat
cttcacaatgagcaggaaaagaaatacaagaagatcatttgggaaacaatgaaccgagaa
tatcttgaggaacaagcagccaaggaagctgctgtattagaagccaagaagcaacatgag
ttcattttagctaactgtccggaggatgtacaaaagtttgctgctgctgctgctgcttct
gttgcaaagtcaaaaaaggaaaaacaacagaaaagggctgcagaactgaaaaataccggc
cctgctcaaactgctgcagaagcaacaaagcaaatgttagctaaaaagaggctgagcaat
aagatcaactacgatgtgctagagaagctttttgatgattctttacctgagaacccaaag
aaagctcgaactgcatacgattcaacagatgattacggggtaaagagcgacaaatttgat
ccagaagtagatgagaattatgaaaacacatttggcgaggatgttggaggatatggctat
gatcaagactatgatttggatgattattga
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