Solanum stenotomum: 125843251
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Entry
125843251 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125843251 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125843251
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125843251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_14
TPR_1
Motif
Other DBs
NCBI-GeneID:
125843251
NCBI-ProteinID:
XP_049378418
LinkDB
All DBs
Position
10:43332759..43410925
Genome browser
AA seq
2510 aa
AA seq
DB search
MDDKDTELLCKVSANHLFLAQFEPFRATIRSLRVRNPELSRVILQTIVANGGRFDSIIWS
QSCPSPALLTFLCTLELLQFNEPTSQLWSFDAAALKLRAEFCLILQNVISRVSESISSSE
LGAEAVDEVELNGDVSGIDEDLKGLGDSLRVLVKISDMGLRRLRPDLIEMDDAIDTGGDI
VVEEEEMMCLRRVFLENADIFDVLSLNIEKQVGWIENEDSDMAITVRTVVKHNEVEDKVL
KSLQKCIQTAHLEAMRECLMNNDVDGAVSHIRFLHLNYGINEEEYRVVSKDLLRRVLPGK
DDYGDARREMRDKFLSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESVKASESDQIPLPL
QHLQNFIQELNSETTLNSTNSLLETVITSCMREMYQYARVHGVHLLECVMDTALSAVRKQ
KLHEASNILLLFPRLQPLLAVLGWDLLSGKTDLRRKLMQLLWTSKSQVLRLEDSPHYGNR
SDEVSCVEHLCDLLCYQLDLASFVACVNSGKSWSLKSSLLLSGKEYMQQGNEDAHWDPFV
ENFVLERLSVQSPLRVLFDVVPSIKFQDAIELISMQPITSNLSAWRRMEDIELMHMRYAL
ESAVLALGEMEKNIGEGVGNDQINSCYLKDLKNHLDAINNIFRKILMVNIIISLLHMDGL
SLNLTPCASSSTSSESSNISKEQQFEDAAQDGQNKTVVMLIGQLLSILRQYLPSSNSEKE
NNWEVNVSAGIKEAIEWRIMNAKRSIEDWEWRLSILQCLLPFSERQWRWREVLTILRAAP
SKLLNLCMQKAKYDIGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVCRAADGTS
PVQELDFSSLRAQLGPLPAILLCIDIAATSAKSSSISCKLLSQAQIMLSEIYPGNSPKIG
STYWDQIREVAVISVIKRVLKRLQEQLEQDKPSALQDILTGEMILLSSKDLQRQGHKERA
LAMLHQMIEDAHMGKRQFLSGKLHNVARALSDEETEREQVKEEGSRSDRKGLLLYSKKGV
LGLGLKTFKQPLTTSAAGDSNIPSGSYDVKETGKRLFGPFSSRMTTFLSQFVLYLAAIGD
IVDGADTTHDFNYFSLVYEWPKDLLTRLVFEQGSTDAAEKAAEIMNADFVHEVVSACVPP
VYPPRYGHGWACIPVIPTYTENYSENRVISPSCREAKPGSFTPSSGDAELPLYPLQLDIV
KHLIKLSPVRAVLACVFGSSILYRGRETTVSRSLKSCFLQTPDADRLFFEFALDQSERFP
TLNRWIQMQTNLHRISEFAIMADHTRNDGKDDVPECKTAMKRFRDHDSDAESEVDELAGS
SNISTNPQEIKNETRGSSDLWHDSLKSENSDRTTVFLSFDCENEGPYEKAVERLIDEGKM
MDALAISDRFLQNGASDQLLQLLIERGEENISGQSQGHSGNNNWSHSWQYCLRLKDKQLA
ARLALKYLHRWELDAALDVLTMCSCHLLKNDPIKDEVVQMRQALLRYSHILSADNRFHSW
LEVESKCKEDPEGLALRLAEKGAVSAALKVAESEGLSIELRRELQGRQLVKLLTADPLNG
GGPAEASRFLSSLRDTADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSELEVSRLN
SWALGLRVLAALPLPLQQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDNNMIL
IYAAKAIAVSISSPSRDPRISISTPRARQKAKLGTPTRSSFTSSLSNFQKEARRAFSWVQ
TGDKGTAKDRKRKSSGVMQSERVAWEPTTSIQEDRVTLFSADGQERLPAVAIAEMWMLTG
DPKKDEAVRSSHRYESTPDITLFKALLSMCSDESASAKGALDLCIGQMKSVLSSQKIPEN
ATMETIGRAYHATETFVQGLFFAKSLLRKISGSTDLSSNLERSRDADDASSDAGSSSVGS
QLTDELSEVLGQAEMWLVRAELLQSLLGFGVAASLDDIADKESSEHLRNRLILDEKYSMA
VYTCKKCKIDVFPVWKAWGHALIRMERYTQARVKFKQALQLYKGDAATVIMEIIGTIEGG
PPVDVSSVRSMYEHLARSAPAILDDSLSADSYLNVLFLPSKFARGERLKFFLEAFNDNFS
NSTYFEEEPKSNLDSVRYAECISYFQDYARQHLFDFMFRHGHYKDACLLFFPPNSVPPPP
QPSSLGVVTSSSSPQRQDPLATDYGTLDLLCELCIAYGAMSVLEEVLSGRTSNITSLDPS
VNKHTTAALSRICTYCETHKHFNYLYKFQVIKKDHVAAGLCCIQLFMNSSSQEEAIRHLE
NAKMHFEEGLSARHKAGESTKLITKGIRGKSASEKLTEEGLVKFSARVAIQIDVVKCFND
AEGTQWKHSLFGNPNDPETFRRRCEIAETLAERNFDLAFQVIHEFNLPAVDIYAGVAASL
AERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLA
CVVCGRLKSAFQIASRSGSVADVQYVAHQALHANAHPVLDMCKQWLAQYM
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaagacacagagctgctgtgtaaagtcagcgcgaaccatctttttttagct
caatttgagccattccgagccactatacgtagtcttcgtgttcgaaatcctgaactttct
cgagtcattcttcaaacaattgttgcaaatggaggaagattcgattcgattatctggtct
caatcttgcccgtctcctgcacttctcacttttctatgtacccttgaacttctccaattt
aacgaacccacttcccagctttggtcgtttgatgctgctgctcttaaattaagggctgag
ttctgtttgatcttacaaaatgtgatttcaagggtttcggaaagcatttcgagttcggaa
ttgggtgcagaagctgtcgatgaagttgaattaaatggagatgtttcgggcattgatgag
gatttgaagggtttaggtgacagtttgagggttttagtgaaaatttctgatatgggtttg
aggcgcttgaggccggatttgattgaaatggatgatgccatagatactgggggagatatt
gtagtggaggaagaggaaatgatgtgtttgaggagagtgtttcttgaaaatgcagatatc
tttgatgttttgtcactaaatatagagaagcaagttggttggattgaaaatgaggattcg
gatatggcgattacagtcaggacagtagtaaaacataatgaggttgaggataaggtgctt
aaatcgctgcaaaaatgcattcaaactgcacatttggaagctatgagggaatgcctgatg
aataatgatgtggatggagctgtttcgcatattcgatttctacatttgaattatggtatc
aacgaggaggagtatcgtgtggtctcaaaagatctactcagaagggtgttacctgggaag
gatgattatggagatgcccggcgtgagatgcgagacaaattcttgtcagtttatggggaa
gcactttcatctcgttgtactcctcttgttaagatgatacaggtaattcatgatgaaatg
ctcttggaagagattgagagtgtcaaagcttctgaaagtgatcagattcctctacctctt
cagcatctccaaaattttatccaagaactgaattctgagacaactttaaacagcacaaat
tcattgctggagactgttattacttcttgcatgagagaaatgtaccagtatgctcgtgtt
catggcgtgcatttattggaatgtgtcatggacactgccctgtctgccgtgagaaagcag
aaactgcatgaggctagcaatattcttttgctgtttccccggctccaacctcttctagcc
gtccttggttgggatcttttgtctggtaaaacggatttaagaaggaaattgatgcagctt
ctgtggacaagtaaatcacaagttcttcgtttggaagactctccacattatgggaacaga
tcagatgaggtgtcctgtgttgaacatctctgtgatctcctttgttatcagcttgatctt
gcttcttttgtagcatgcgtgaattctgggaagtcatggagtttgaagtcgtcgctactg
ttgtccggtaaagagtatatgcagcaaggaaatgaagatgcgcattgggatccctttgtt
gaaaattttgtgctggaaagattatctgtacagagtccattgcgggtattatttgatgtg
gttccaagcattaagtttcaagatgctattgaattgatcagcatgcagccaattacttcc
aatctatcagcctggaggaggatggaagacattgaactcatgcacatgcgttatgctttg
gaatctgctgtccttgcacttggagagatggaaaagaatataggggagggagtaggaaat
gaccagatcaattcgtgctacctgaaagatttgaagaaccatcttgatgccatcaacaac
attttccgcaagatattgatggtgaacattattatctctcttctgcatatggatggtctc
tctctcaatttgacaccttgtgcttcatcaagcacctcatctgagtcatccaatatctct
aaggagcaacaatttgaggatgcagctcaagatggacaaaataagaccgttgtaatgtta
atagggcaactgttgagtattttacggcagtatctaccatcttcaaactcagagaaggaa
aataattgggaagtaaacgtatctgctggtattaaagaagccatagaatggagaattatg
aatgcgaaaagatctattgaggattgggaatggcgtttgtcaattttgcagtgccttctg
ccattctcggaaagacagtggagatggagggaggttcttactattctacgtgcagcccca
tcgaaactgctaaacctctgtatgcaaaaggcaaagtatgatattggagaagaggctgtc
aaccgcttctctttgcctccagaagacaaagctacactagagctagctgaatgggtagat
agcgcctttggaagagcatctgttgaagatgctgtttgccgtgctgctgatggaacctct
ccggtccaagaattggatttctcttctttacgtgctcagctaggtcctctaccagctatt
ctcctgtgcattgatatagctgcaacttctgcaaaatcttcaagcatatcctgtaagctt
ttaagtcaggcacaaattatgttgtcagagatttaccctggtaattcccctaaaattggg
tcaacctactgggatcagattcgtgaagtagcagttatatctgtaatcaagcgcgtcctt
aagcgtctacaggaacaactggaacaggataagccttcagctcttcaagacattttaact
ggagaaatgatccttttatcctcaaaggatcttcagcgccaaggacataaggagcgtgca
ctagctatgctgcatcaaatgattgaagatgctcatatggggaagagacagtttcttagc
ggtaagctccacaatgtggcaagagctttatctgatgaagaaacagagagggaacaggtt
aaggaggagggctcacgttctgacagaaaaggattgttactgtacagcaaaaagggggtt
cttgggcttgggttgaaaaccttcaagcagccgctgacaacttcagcagctggtgacagt
aatataccttctggtagctatgatgtcaaggaaactggaaaaagattatttgggccattc
agctccagaatgaccacgtttctctctcaatttgtcctctaccttgctgctattggtgac
attgttgatggggctgataccactcatgacttcaactacttctcacttgtgtatgaatgg
cctaaagaccttttaactcgtctagtgtttgagcaaggaagtactgatgcagctgaaaag
gcagcagagattatgaatgctgattttgtccatgaagtggtttctgcttgtgttcctcca
gtttatcctccaagatatggtcatggttgggcttgcatcccggtgattcctacatacact
gagaactactctgaaaatagagtaatatccccttcatgtagagaggccaagcctgggtct
ttcactccttcctctggggatgctgaattacctctctatcctctccaattggatatagtg
aagcatctcatcaagttatccccagttagagctgtattagcatgcgtctttggaagttct
atactttatcgtggcagggagactactgtatctagatctctgaaaagttgctttctacaa
actcctgatgctgataggttattctttgagtttgctcttgaccaatctgagaggttccct
accttgaatcgctggatacagatgcagaccaatcttcatcgaatctcagaatttgcgata
atggctgatcacacgaggaatgatggtaaagatgatgtacctgaatgtaaaactgctatg
aagcgatttcgtgatcatgacagtgatgctgaatctgaagttgatgaacttgctggtagc
agtaatatatcaacgaatccccaggagattaagaatgaaacgagaggatcttctgatctt
tggcatgattccttaaaatccgaaaattctgatcgtacaacagtttttctttcctttgat
tgtgagaatgaaggcccatatgagaaagctgtggaacggttgattgatgaaggaaaaatg
atggatgctcttgcaatttctgatcgtttcttgcaaaatggagcctcagatcagttgctt
cagttgctaattgaacgtggagaagaaaatatatctggacagtctcaaggtcattcaggc
aacaataattggagccacagttggcagtactgtctccgtttgaaagataaacaattggca
gctagacttgcgctcaaatatttgcatagatgggaactagatgctgctttggatgttctc
actatgtgcagctgccacttgctcaaaaatgatcctattaaagatgaggttgttcagatg
agacaagctctcctgaggtacagccatatattaagtgcagataaccgcttccacagctgg
ctagaggtggagtctaagtgtaaagaagatcccgaaggtcttgcccttagattagctgag
aagggagctgtttctgctgctttaaaagttgctgaaagtgaagggctatctattgaactg
cgcagagagctgcaggggcgtcaacttgtgaagcttctcactgcagatcctttaaacggt
ggaggccctgcagaagcttcacgttttctttcttctttacgtgatactgcagatgcttta
cctgttgcaatgagtgcaatgcagcttttgcccaaccttcgatcaaagcagcttctcgtt
cactttttcctcaaaagaagagataataatttatccgagttggaagtttctaggctcaac
tcttgggcattaggattacgtgttctggctgctttgccgttaccgttgcagcaaaaatgc
tctccgctacacgagcaccctcatttgattctagaggttttgctgatgagaaaacaactt
caatctgcttctctgatacttaaggaattcccctccttgagagacaacaatatgattcta
atatatgctgccaaagctattgctgtcagcattagttctccttccagggacccgaggatt
tcaatttcaactccaagagcaagacagaaggcaaaattgggaacacccacaaggtcatca
ttcactagtagccttagtaattttcaaaaagaagcccgcagagcattttcttgggtccaa
actggagataaaggtacagccaaggataggaagagaaagagctctggagtaatgcaatca
gagagggtggcttgggagccaactacttccattcaggaagaccgtgtcacattattttct
gcagatgggcaagaacggctgcctgctgttgcaattgctgagatgtggatgctcacaggt
gacccaaagaaagatgaagctgtccgttcttctcatcggtatgaaagtaccccggatata
actcttttcaaggccctgctttcaatgtgttcggatgagagtgcatctgccaaaggtgct
ttggacttgtgtataggccagatgaaaagtgtattaagctcccaaaagatacctgagaat
gcaactatggaaactattggccgagcatatcatgccacagaaacttttgttcagggcctg
ttttttgctaaatcccttcttagaaagatttctggaagcactgacttgtctagtaatttg
gaaagaagtcgggatgcagatgatgcatcttctgatgctggcagctctagtgtgggtagt
caattgacagatgagctgtctgaagtactgggacaagctgagatgtggctagtacgtgct
gaattgctgcaaagtcttttgggtttcggagtagctgcctcacttgatgatatcgctgat
aaagagtcatctgagcatcttcggaatagattaattctagacgagaaatacagcatggct
gtttacacttgcaagaagtgtaagattgatgttttccctgtgtggaaagcatgggggcat
gctctgattaggatggagcgctacacgcaagctcgtgttaaatttaagcaagcactacaa
ttatacaagggtgatgctgcaactgttataatggagattattggcaccattgaaggaggt
ccaccagtggatgtttcatctgttcggtccatgtatgagcatctggctcgaagtgcacca
gccattttagatgattctctttctgctgattcctatctcaatgtgttattcctaccatcc
aaatttgcacggggagagagactcaagttttttttagaagctttcaatgacaatttttcc
aacagtacatactttgaagaagaacctaagagcaacttggacagtgttagatatgctgaa
tgcatcagttattttcaagattatgctcgccaacatctgtttgatttcatgtttcgacat
ggccattacaaggatgcttgcttgttatttttccctcccaattctgttcctccacctcct
caaccatcttcattgggcgttgtcacttcgtcttcttcccctcaacgtcaagatcctttg
gctacagattatgggacccttgatctattgtgtgaattgtgcattgcttatggggccatg
tctgttttggaggaagtattgtcaggaagaacttcaaatataacatcactagatccatca
gtgaacaaacatacaactgcagcactttctcgcatctgtacttattgtgaaactcacaag
catttcaattatttatacaagtttcaggtgataaagaaggatcatgtggcagctgggctt
tgttgtatacaattgtttatgaactcttcttctcaagaagaagctataagacacttggag
aatgccaagatgcatttcgaggaaggcctgtcagcacgacataaagcaggagagtctact
aagcttattaccaagggcatccgagggaaaagtgcctctgagaaactaactgaagaagga
ctagtcaaattttctgctagagttgctatccagatagatgttgtcaaatgctttaatgat
gcagaaggaacacagtggaagcattcactttttgggaatccaaatgatcctgaaactttc
aggaggaggtgtgaaattgcagagactcttgcagagaggaattttgacttggctttccag
gtgatccatgagttcaaccttccagctgttgatatatatgctggtgttgctgcatcactt
gctgagagaaagaggggaagccaactcacggagttctttaggaacattaaaggcaccatc
gatgatgatgattgggatcaggttttgggggcagccattaatgtgtatgcaaacaaacac
aaagagcgacctgaccgcctgattgacatgttgactagtagccacaggaaagtacttgca
tgtgttgtttgtgggcgtctcaaaagtgcattccaaattgcatctagaagtggaagtgtg
gcggatgttcaatatgttgcacatcaggcattacatgctaatgcacatccagttcttgat
atgtgcaagcaatggctcgctcagtacatgtag
DBGET
integrated database retrieval system
