Solanum stenotomum: 125843343
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Entry
125843343 CDS
T08385
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125843343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125843343
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125843343
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125843343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
PAP_RNA-bind
NTP_transf_2
UbiA
Motif
Other DBs
NCBI-GeneID:
125843343
NCBI-ProteinID:
XP_049378539
LinkDB
All DBs
Position
1:complement(30728400..30733293)
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AA seq
499 aa
AA seq
DB search
MEFGHIERQQLVDLRHVNTYLPRWSIGLRPNSNLDYQVGHFNPLPPLDGVLGFGGNPDGI
LRMEMERSMSLFQIMGDEGLVPSLEEEMKRRNAIHKLKKIVREWVQTVAYHHVLPKRYLR
FASGTILTYGSYGLEVHNSESDIDALCVGPCFATIEEDFFIVLRNILASRPEVSDIHCVK
GAKVPLMRFKFDGISIDLPYARLKVISIPEDVDVFNPFFLKNIDDKSWKSLSGVRANRRI
LQLVPNVEIFQAVLRCVKLWAKKRGVYGNLLGFFGGVHLAVLSAFICQRHPTASLSALFF
IFFKTFAFWPWPTPVVLQDGVAWPFIPTDKVLWMPIQLPCSPYQFCHSNIVRSTFFKIKS
EFMRGHMLTKDMLRPEFDWNILFEPFPYPRKYEKFVKIFLSASDKDELGDWVGCVKSRFR
CLIIKLEELLGFCDPNPTEYADVDASEPNVVFYWGLPPAMTDMINIGHVEVEFLKSTNNV
YQGPTGKLKLSIVQDDQLP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgggcatattgaaaggcaacaattggttgatcttcgacatgtgaatacatat
ctacccagatggtcaattgggttgcgtccaaactcgaatcttgattatcaggtaggccat
tttaaccccctaccccctcttgatggggttttgggttttgggggaaacccagatgggatt
ctaagaatggagatggaaaggtcaatgtcactctttcagattatgggcgatgaaggttta
gtgccttcgctagaggaggaaatgaaaaggagaaatgctattcacaagctcaaaaagata
gtgagggaatgggttcagacagtggcttaccatcatgtacttcccaaaagatacctcagg
tttgcctctggcacaatattgacatatggatcatatggtctagaagttcataattcggag
tctgatattgatgcattatgtgttggaccgtgctttgcaacaatagaagaagactttttc
attgttctgcgcaacattctcgcgagcagaccagaagtatcagatatccactgtgtcaaa
ggtgcgaaggttcctctgatgagattcaaatttgatgggatctctattgatcttccatat
gcacgactaaaagtaatatccatacctgaggatgtggatgtattcaatccattcttcctg
aagaatattgatgacaagagttggaaaagtctgtctggtgttcgtgcaaataggagaatt
cttcaacttgtgccaaatgtagagatattccaggcagttctgcgttgtgttaaactatgg
gcaaagaaacgaggagtttatgggaatttgctcggattctttggaggagttcatttagca
gtgctttcagcattcatctgtcaaaggcatccaacagccagcttgagtgcactttttttt
attttcttcaaaacatttgccttttggccttggccgactccagtagttttacaagatgga
gttgcttggccatttattcccacggataaagttttgtggatgccaatccagttaccatgt
agcccatatcaattttgtcattcaaacattgtgagaagtacatttttcaaaatcaagagt
gagttcatgagagggcatatgctgactaaggatatgttaaggccagaatttgattggaac
atcctgtttgagcccttcccttatccaagaaaatatgagaaatttgtcaaaattttcctc
tcagcttctgataaagatgagctaggtgactgggtgggttgtgtcaaatcacgctttcgc
tgcctaattatcaaactggaggagttgctggggttttgtgaccccaacccaacagagtat
gctgatgttgatgcatccgagcccaatgtcgttttttattggggattgccacctgctatg
accgatatgataaatataggtcacgtggaggtagagttcttgaagagcacgaacaatgta
tatcaaggcccaactgggaagctgaagttatcaattgtgcaagatgatcagttaccttaa
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