Solanum stenotomum: 125843538
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Entry
125843538 CDS
T08385
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125843538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_8
LRR_R13L1-DRL21
NACHT
AAA_14
AAA_16
AAA_22
LRR_4
Roc
TniB
DO-GTPase2
AAA_33
NPHP3_N
ATP_bind_1
TsaE
Viral_helicase1
LRR_RPS2
ATPase_2
DUF948
MobB
KAP_NTPase
MeaB
cobW
Motif
Other DBs
NCBI-GeneID:
125843538
NCBI-ProteinID:
XP_049378609
LinkDB
All DBs
Position
1:complement(21226396..21229929)
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AA seq
971 aa
AA seq
DB search
MGLFLFSLQKEMNIDTCEDQVEMADCAVVFLLDKLTNLLAEEAILLQGVKHEIQYIKDEL
ERMIAFLGVADAFEEGDAEVKVWVRQVRDVANDIEDVLDESMLLSYDHHYRGSCCFIAKL
VFSIRNIKFRHKLVIEIQAIKSRVDNIAMGHHRYRYKFYVPEQGSNSNHAYDAANDRRGD
ALLLEEAELVGIENPTQQLIGWLVEDDPRLKVVSVVGMGGSGKTTLVKKVYEDAAVKKNF
NSLAWITVSKSFKVEEVLKDMIQQLYDEVKQPAPEGLNTMSSNRLKTIAKVFLQSRTYVL
VFDDVWTIHAWEAIRHALPDINNGSRVILTTRLLDLASFCSIETNGYVYEVKPLSTEESW
ILFCQKAFHGYSCPSHLESISRNILKKCGGLPLAVVAVGGVLATKNRNNIREWGMLNHSL
GPELDSNDKFESMRIILLLSFNDLPYYLKPCFLYLSIYPEDHLIERNTLIYRWITEGFVK
QKERRTVEDVADSYLNELINRSLIHPVQYNDDGSMKLGRIHDLYRELILSKSRDDNFTAT
VDEHNKLWPEKTRRLSMHGMLGNLQVKRSVTKLRSLLTFGVADPQSLSCISQVLGSSRML
RVLDLRGAPLNMIPETVFQLFHLRYLSLRNTNVKVLPRSIGRLKQLEILDLKQTYVTELP
VEILKLENLRHLLVYSHVSYSYLPYNCSPGFKAFRGIGALRALQKLVYIEATPGSGILRE
VGMLGELRRLCILKLRKEDGWTVCSSIQKLRKLESLNLKSVEEHEILDLSYLSSPPPLLQ
RLYLTGHIVKLPAWIQDLNSLVKIYFRWTHLTEDPLKYLQDLPNLVHLEFLVGYTGKELY
FEQGKFQRLKLLNLDKLEGLSQVTIGEGAVPHLEKLVIQRCALLETVPTGIEYLLNLKVL
EFFDMPDEFIMTLRPEKLGADAWKVSHIPEVFYTYWRDGCWMVHSLKEKENNQISDQSGA
VTRTYGRRNSL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttcttattttcattacaaaaagagatgaacatagacacttgtgaagatcag
gtagagatggcagactgtgctgtcgttttcttacttgacaaactcacaaacttattagcg
gaagaagcaatattgcttcagggagtcaagcatgaaatccagtatatcaaagatgaattg
gagagaatgatagcctttcttggtgtggctgatgctttcgaagagggagatgctgaggtc
aaagtctgggttaggcaagtgagagatgtcgctaatgacattgaggatgttcttgatgag
tccatgctcttatcgtatgatcatcactaccgtggatcttgttgtttcattgctaaattg
gttttctcaatcagaaacatcaaattccgccataaacttgtcattgaaatccaagccatc
aaatcaagagttgacaatattgcaatgggacatcataggtaccgttacaaattttatgtc
ccggagcaaggctcaaattctaaccatgcctacgatgctgcaaatgatcgcagaggtgat
gcattattgttagaagaagctgagcttgtgggcattgaaaatcccacacagcagctaatc
ggttggctcgtggaggatgatcctagacttaaagtggtttcggtggtggggatgggaggt
tcaggaaagaccaccctggttaagaaagtgtacgaggatgcagcagtcaagaaaaacttc
aatagccttgcttggataacagtttccaagtccttcaaggttgaggaagttttgaaagat
atgattcaacagctctatgatgaagtgaagcagccagcacctgaaggtctaaacaccatg
agtagtaacaggctaaaaacaatagcaaaagtattcctccaatcgagaacgtatgtgcta
gtttttgatgatgtctggaccattcatgcttgggaagctatcagacatgcattgcctgat
ataaataatggaagtcgtgttatcctcacaacacgtcttttggatttggcttccttctgt
agcatagagaccaatggctatgtttatgaggtgaaacccttgtctactgaagagtcatgg
attcttttctgccaaaaggcatttcatggttattcatgcccttcacacttggagagcatt
tcaaggaacatcttgaaaaaatgtggtggactgccgctggctgttgtggccgttggtggg
gttttggctacaaagaacaggaacaacattagggaatggggaatgcttaatcacagcctt
ggccctgaactggatagcaatgacaaatttgagagtatgagaataattttgttactcagt
ttcaatgatctcccctactatcttaagccatgtttcctgtatttgagcatttatcctgag
gatcatctaattgagcgcaatacactgatctaccggtggataacggaaggatttgttaaa
caaaaagaacggaggacagttgaagacgttgcagacagctatctcaatgagctcatcaac
agaagcttgatccatccagtgcagtacaatgatgacggtagcatgaaattgggtaggatt
catgatttataccgcgagcttattctatcaaaatcaagagatgataactttactgcaaca
gtggatgagcataataaattgtggcctgaaaaaactcgacggctgtcaatgcatggcatg
ttgggcaacctacaagtgaaaaggtcagtcactaaacttcgctctttgcttacatttggt
gtagcagatccacagtccttgtcttgcataagtcaagtgcttggtagctcccggatgcta
agagttttagatttgagaggagctcctctaaatatgattccagagacggtcttccaattg
tttcacttaaggtatttaagcttgaggaataccaatgtgaaagtgcttccaagatccatt
ggaagactcaaacagctagaaatattagatctgaagcagacatatgtcactgagttgcct
gtggagattttaaaacttgaaaatctccgtcaccttttagtctatagccacgtatcctat
tcgtatcttccttacaattgttcaccaggttttaaggctttccgaggaattggagctttg
agagccttgcagaaacttgtgtatattgaggcaacccctggcagtggcatacttagagaa
gtaggaatgttgggtgaactgagacgactttgtattctgaagttgagaaaagaagatggt
tggactgtgtgctcatcaattcaaaagctccgcaagcttgagtctttaaatcttaaatca
gtggaagagcatgagatccttgatctttcttatctgtcgtctcctccgcctcttcttcag
cgcctgtatttgacaggacacattgttaagttgcctgcgtggattcaagatcttaattcc
ttggtcaaaatttacttcaggtggactcatttaacagaagatccactgaaatatctccaa
gatttgcccaatcttgtccatcttgaatttcttgtaggatacacaggaaaggaactctac
tttgagcaagggaaatttcaaaggcttaagcttttaaatttggacaagctggaaggacta
agccaggtgacaatcggcgaaggtgcagtacctcatcttgagaagctggttatccagaga
tgtgctttgcttgaaactgtgccaactggaatcgagtacctcctaaatctgaaggttctt
gaattctttgacatgcctgatgaatttatcatgacattgcgtccagaaaaactaggtgct
gatgcttggaaagtttcacatatccctgaagtattctatacctattggagggacggttgt
tggatggtacattcactaaaggaaaaggaaaacaatcagatttctgatcagtctggagct
gtcactaggacctatggaaggcgaaattcactctag
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