KEGG   Solanum stenotomum: 125843555
Entry
125843555         CDS       T08385                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sstn  Solanum stenotomum
Pathway
sstn03082  ATP-dependent chromatin remodeling
sstn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125843555
   03083 Polycomb repressive complex
    125843555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sstn03036]
    125843555
Enzymes [BR:sstn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125843555
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125843555
   HDAC complexes
    Sin3A-HDAC complex
     125843555
    BRAF-HDAC complex
     125843555
    REST complex
     125843555
    SHIP complex
     125843555
    MiDAC complex
     125843555
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125843555
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125843555
  Chromatin remodeling factors
   NuRD complex
    125843555
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 125843555
NCBI-ProteinID: XP_049378634
LinkDB
Position
11:complement(6511769..6521379)
AA seq 430 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYGLHSKMEVYRPHKAYPVEL
AQFHSADYVEFLNRITPETQNLFPSEMARYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNKLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDMKDTGERDGRFYSINVPLKDGIDDGSFTRLFKT
IISKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWALETGVLLDTELPNEIPDNDYIKYFAPDYSLKLPGGHIENLNSKSYIGTIK
MQVMENLRCLQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVNQHTQDKHIQRDDEYYEGD
HDNDNHTDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaggtccaaggacaaaatctcctacttctacgacggtgatgttggaagcgtatacttt
ggtccgaatcatccaatgaagccgcacaggttgtgtatgactcatcatctggttctagct
tatggtcttcacagcaagatggaagtttataggcctcacaaagcatatccagtggagcta
gcgcagtttcattctgctgattatgtagaattcttgaacagaataaccccagaaactcag
aacttgttccctagtgaaatggcaagatataatcttggagaagattgccctgtatttgac
aacttattcgagttttgtcaaatatatgctggtggaacaatagatgctgcacgaagattg
aataataagctttgtgatattgcaataaattgggctggtggattgcatcatgccaagaag
tgtgcggcttcaggattttgctatatcaatgacctagttctggggatattggagcttcta
aagtatcatccgcgggtgctctatattgatattgatgtgcatcacggtgatggtgtagaa
gaggccttttattttactgacagggttatgaccgttagtttccacaagtatggggataag
ttctttcctggaactggtgatatgaaggatacaggggaaagagatggaagattctattcc
ataaatgtgcctctcaaggatggaatagatgacggtagtttcactagactcttcaaaaca
attatttcaaaggttgttgaaacatatttacctggtgcaatagttctgcaatgtggggca
gattcgcttgctggagaccgtctgggctgcttcaacctctccattgatggacatgctgaa
tgtgtaaggtttgtgaagaaatttaatttgcctctgctggtaactggaggtgggggatac
acaaaagagaatgtcgcccgttgttgggctctggaaaccggagttcttttagacacagag
cttcctaatgaaataccagacaatgattacatcaaatattttgcccctgattattcactg
aagcttcctggtggacacatagagaacctgaatagcaaatcatacattggcaccataaaa
atgcaagtgatggaaaatctccgttgcctccagcatgctccgagtgtacagatgcaagag
gtaccacctgacttttatattcctgattttgatgaagatgaacaaaatccagatgagcgt
gtgaatcagcatacccaagataagcatatccaacgtgatgatgagtattatgaaggcgac
catgacaatgataaccacactgatgatgcctaa

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