KEGG   Solanum stenotomum: 125843558
Entry
125843558         CDS       T08385                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125843558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125843558
Spliceosome [BR:sstn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125843558
 Complex B
    125843558
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 125843558
NCBI-ProteinID: XP_049378637
LinkDB
Position
11:complement(6687240..6692322)
AA seq 309 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDSITP
GVDAQGNPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE
QAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGRYRRRHSRSRSRSPYRHRSYEDRSHRSHSRKHDERDHYYESRSRRNRSTSPDHK
RGRRRSPGGRRDQSPVRDGSEERRARIEQWNREKEQAELDNRANADSNYKNESNWNGSAP
NQDLYYNQQ
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcagaacacttagcttcaattttcggtactgaaaaggatagagtgaattgtcctttc
tacttcaagatcggtgcttgtagacatggagatcgatgttcgaggctccatacgaaacca
agtattagtcctactattctcctctcaaatatgtatcaaaggcctgattcaattacccct
ggtgttgatgctcaaggcaatcccattgatcctcgcaaaatccaggaacattttgaggat
ttttatgaagacttgtttgaagaactgaacaagtatggagagattgagagcctgaatatt
tgtgacaatctggctgatcacatggttggtaatgtttatgttcagtttagagaggaagag
caggctgcaaatgcactgaagaatcttactggaagattttatgccggaaggcccatcatt
gttgatttctctccagtgactgattttcgtgaagccacctgtcgacagtacgaggaaaat
gtctgcaaccgtggtggatattgcaactttatgcacctcaaaaagatcagcagggaattg
cgacgtcagttgtttggaaggtataggagaaggcatagcagaagcaggagccgaagccct
tataggcatcgcagctatgaagaccgctctcacaggagccatagtagaaagcatgatgaa
agggatcattattacgagagtcgaagcaggaggaacagaagtacaagccctgaccacaag
aggggtaggaggaggagtcctggtggcagaagagaccaaagtccagttagggatggcagc
gaagagaggcgtgcaagaatagagcagtggaacagggaaaaagaacaggcagaacttgat
aacagggctaatgcagacagtaattacaaaaatgaaagcaattggaatggatctgctcca
aaccaagatctgtattataatcaacaatga

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