Solanum stenotomum: 125843607
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Entry
125843607 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125843607
00071 Fatty acid degradation
125843607
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125843607
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125843607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125843607
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125843607
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125843607
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125843607
Exosomal proteins of breast cancer cells
125843607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125843607
NCBI-ProteinID:
XP_049378703
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All DBs
Position
11:complement(41803553..41811990)
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AA seq
696 aa
AA seq
DB search
MGPYVAGVLVPLVVTILLQNRRSRKKRGLPADVGGEPGYAIRNSRFTAPVETAWDGITTL
AELFEYSCKKHYHKKLLGTRKLLSREMEVSADGRSFEKLHLGDYEWLSYGQAFEIVCNFS
SGLALLGHQREERVAIFADTCEEWLMALQSCFRRNVTVVTIYASLGEEALCYSLNQTEVT
TVICGQKELKKLVDISGQLDTVKRVICIDNEIPSSAIVAAGSNWVLKTFSEVETLGRGNP
VDPDLPLAADIAVIMYTSGSTGLPKGVMMTHRNVLATASAVLTIVPGLGSKDVYLAYLPL
AHILELAAETIVPGIGGSIGYGSPLTLTDTSNKIKKGTKGDASALSPTVMAAVPAILDRV
RDGVRKKVDAAGGLSKKLFDLAYSRRLSAINGNWLGAWGLERHFWNLLVFKKVQAILGGR
IRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDYDDTSVGRVGPPLPCS
YIKLIDWAEGGYLTSDSPMPRGEIVIGGPNVTVGYFKNEEKTKEVYKVDERGMSWFYTGD
VGQFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAVLIVSPYVDNIMLHADPFHSYCVAI
VVAAQAAVEDWARKHGINFVDFQELCQKEETIKEVYASLVKAAKGARLEKFEIPAKIKLL
SEAWTPESGLVTAALKLKRDVIKKAFSQELAQLYSS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggccttatgttgctggtgttcttgttcctctggtagtaactattctccttcagaat
agaagaagtcgaaaaaagcgaggcttgcctgctgatgttggtggtgaacctggctatgct
atcagaaacagtcggttcactgcaccggtagaaacagcatgggatggaatcacaaccctg
gcagagctttttgagtattcatgcaaaaagcactatcacaagaagttactaggaactcgg
aaactgctttccagagagatggaagtatctgcagatggaaggtcattcgagaaactacac
ttgggtgattatgagtggttgagttatggtcaggcatttgagattgtgtgcaatttctcc
tctggtttggcactacttgggcaccaaagagaagaacgtgtggccatttttgctgataca
tgtgaagaatggttaatggcattacagagttgcttcagacgcaatgtgacagtggttact
atttatgcatcacttggtgaagaggccttgtgttactcactaaatcagacagaggttact
actgtcatttgtgggcaaaaggaactaaagaaacttgtagacattagtggacaacttgat
accgtcaaacgtgtgatatgcatagacaatgagattccatcaagtgccatcgttgctgca
gggagcaactgggtattgaagaccttttccgaggtggaaactcttggccgaggaaaccct
gttgacccagatttacctcttgcagctgatattgcagtgatcatgtataccagcggaagt
actggtctgcccaagggtgtgatgatgacacacaggaatgttctagctacagcttctgct
gttctgacaattgtacccggtcttggaagcaaggatgtttacttagcatacctgccgctt
gctcatattctcgagcttgcagcagagaccatagtacctgggattggtggttctatagga
tatggttctcctctgacccttactgatacttcaaataagataaagaaaggaacaaaagga
gatgcctctgcgttaagcccaactgtgatggcagctgtccctgccattcttgatcgggtt
cgagatggcgtgcgtaaaaaggtagatgctgcaggtggattatccaaaaaactgtttgat
ttggcatattctcgtagactgtctgcaattaatggtaattggcttggagcttggggctta
gaaagacatttctggaaccttttagtgtttaagaaggttcaagcaattcttggcggacgt
atccgttttatcctgtcaggaggagctcctctctcaggtgatactcagagatttatcaac
atatgccttggtgctccaataggccaaggttatggtcttaccgagacctgtgctggtgga
acatttagtgattatgatgatacttctgttggacgtgttggtcctccacttccttgctcg
tacatcaagttgatagattgggctgagggcggatatctaacaagtgattccccaatgcct
cgaggtgaaattgttattggtggaccaaatgttaccgttggatattttaaaaatgaggag
aagacgaaagaagtgtacaaggttgacgagagaggaatgagctggttctacacaggtgac
gtagggcaatttcatgcagatggttgccttgagataattgaccgtaaaaaagacattgtt
aaacttcaacacggggaatatgtttccttggggaaggttgaggctgttcttattgtcagt
ccctatgttgacaatataatgttacatgccgatcctttccatagttattgtgtagctata
gtggtggccgctcaagctgctgtggaagactgggctaggaagcacggaattaactttgtc
gattttcaagagttatgtcagaaggaagaaactatcaaggaggtgtatgcttccttagtg
aaggcagcgaaaggtgctcgtttggagaagtttgagatcccagcgaagatcaagttgtta
tcggaagcatggacaccagaatctgggcttgtgactgcagccttgaagctgaagagggat
gtcattaagaaggccttctcacaggaactagctcagttatattcttcatga
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