Solanum stenotomum: 125843618
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Entry
125843618 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125843618
04121 Ubiquitin system [BR:
sstn04121
]
125843618
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125843618
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125843618
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125843618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125843618
NCBI-ProteinID:
XP_049378723
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All DBs
Position
11:complement(42395369..42397034)
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AA seq
332 aa
AA seq
DB search
MSSTENPNNGNRNFHRYWCYQCHLIVRVSPENPSEIICPRCFGHFLYEIDEANPGQILDF
TAFDPSPEARILEALTLMLDPNLFNTSQGNVVPIFRRSDGTETLVPLPTRGRHERTRDFW
LRPRRRYSFLNNDTDEFTPESGILARPRSWIVIRPSGGPDRRERGRLGPHEVNNSRDYFT
GPGLENLIEELTQNDRPGAPPAPEPIINSIPKVVIVAEHLKDDSECPVCKEKFKIGGEAR
ELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPVSSEAQMDSSDDCLEEEERMNRQRRCFRL
RQMAASLWPFRSRYHPMRNHDEPSVSSSCNIL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaacagaaaaccctaacaatggtaacagaaacttccatcgttactggtgttat
caatgccatctcatcgttagggtatcaccggaaaacccctcggagatcatctgtcctcgt
tgtttcggtcacttcctctacgaaatcgatgaagcaaaccctggacaaatcttagacttc
actgcatttgatccttctccagaagctagaattctcgaagctctaactctcatgctcgac
cctaatttattcaacacctctcaaggcaatgtagtccctattttccgtcgttcagacgga
actgaaactctcgtaccactacctacacgtggacggcatgagaggactcgagacttctgg
ttaaggccgagaaggagatactcatttctaaacaacgacacagatgaatttacaccagag
agtggaatcctagcacgtccgcgctcatggattgtcatccgaccatccggtggacctgac
cgcagagaaagagggcggttaggtccacacgaagtaaataatagtagagattatttcaca
ggtccgggtcttgaaaacctaatagaagagttaacacaaaatgatcggccgggtgctcca
ccagcacccgagccgatcattaattcgattccgaaggtagtgattgtggcagaacattta
aaagatgattcagaatgtccggtttgtaaggaaaaatttaaaataggtggtgaagcaaga
gagttaccatgtaaacatatatatcattcagattgtattgtcccttggttaaggctacat
aattcttgtccggtttgtcggaatccgttaccggtttcttctgaagctcagatggatagt
tctgatgattgtcttgaagaagaagaaaggatgaacagacagcggcgttgcttcagactt
agacaaatggcagcttctctttggccatttcgttcgaggtatcatcctatgcgtaaccat
gatgaaccatcggtgtcgtcgtcatgtaatattctttag
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