Solanum stenotomum: 125843686
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Entry
125843686 CDS
T08385
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125843686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125843686
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sstn03037
]
125843686
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125843686
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125843686
Chromatin remodeling factors
SRCAP complex
125843686
INO80 complex
125843686
INO80 complex (yeast)
125843686
SWR1 complex
125843686
ASTRA complex
125843686
Cilium and associated proteins [BR:
sstn03037
]
Motile cilia and associated proteins
Dynein assembly factors
125843686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_18
AAA_19
Mg_chelatase
bpMoxR
AAA_25
Adeno_E4_ORF3
DnaB_C
TsaE
AAA_28
AAA_7
IstB_IS21
AAA_11
nSTAND3
Cdc6_lid
NPHP3_N
Zeta_toxin
Rad17
Motif
Other DBs
NCBI-GeneID:
125843686
NCBI-ProteinID:
XP_049378815
LinkDB
All DBs
Position
11:complement(5143580..5149204)
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEEVQSTIKNQRIATHTHIKGLGLEPNGTPLPLAAGFVGQAAAREAAGLVVDMIRQKK
MAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEEGESVTGGYGKSISHVIIGLKTIKGTKQLKLDSTIYDAL
IKEKVAVGDVIYIESNSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYVDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALECSLSPIVIFATNRGICTVRGTDMTSPHGIPLDLLDRLLIV
RTETYGPAEMIQILAIRAQVEGLEIDEESLAYLGEIGQQASLRHAVQLLSPASVVAKMNG
RDKICKVDLDEVNSLYLDAKSSARLLQEQQDRYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaagaggtgcaatcaacaatcaagaatcagagaattgcaactcatactcac
attaaaggccttggtcttgagcccaatgggacaccactaccattggcagctgggtttgta
ggtcaggctgcagccagagaagctgcagggcttgtggttgatatgatacgccaaaagaag
atggctggtcgggctttactgctagctggtccgcctggcacagggaagacagctcttgcc
cttggtatatcacaagaacttggaagcaaggttccattttgcccgatggttggatccgaa
gtgtattcatcagaagtgaagaaaactgaggttttaatggaaaatttccgacgagctatt
ggtctccgtatcaaggaaaataaggaagtttatgaaggagaggtgactgaactatctcca
gaagagggtgagagtgtgacaggtggatatggtaaaagcattagtcatgttataattggg
ttaaaaactatcaaaggtaccaaacagttgaagcttgactccacaatatatgatgcctta
attaaagagaaggtagctgttggtgatgtcatttacattgaatcgaacagtggagcagtt
aaaagagtgggcaggagtgatgcttttgctacagaatttgatcttgaggctgaggagtat
gttccacttcctaaaggagaggttcacaagaagaaggaaatagtccaggatgttacattg
catgatcttgatgctgcaaatgcacggccacaaggaggacaagatatattgtcccttatg
ggtcaaatgatgaaacctaggaaaaccgagattactgacaagctgcggcaagagataaac
aaggttgtcaatcgttatgttgacgaaggtgttgcagaacttgttcctggtgtcttattt
attgacgaggttcatatgcttgatatggaatgcttttcatacttgaatcgtgccttggaa
tgttcactgtctccaattgtgatttttgccactaacagaggcatttgtactgtcagagga
acagacatgactagtccacatggcattccacttgacttgttagatcggttgttgattgtc
agaacggaaacttatggtccagctgaaatgatacagatattagctatacgtgctcaggtg
gagggactagaaatagatgaagagagccttgcatatttgggagagattggacaacaagct
tctttaaggcatgctgttcagctgctatcgccagctagtgtagtcgccaaaatgaatggc
cgtgataaaatctgcaaggtggatcttgacgaagtgaattcattgtacctagatgctaag
tcttctgcaagacttcttcaggagcagcaggatagatacatctcatga
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