Solanum stenotomum: 125843724
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Entry
125843724 CDS
T08385
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sstn
Solanum stenotomum
Pathway
sstn03020
RNA polymerase
sstn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125843724
09124 Replication and repair
03420 Nucleotide excision repair
125843724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125843724
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125843724
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125843724
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125843724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
125843724
NCBI-ProteinID:
XP_049378867
LinkDB
All DBs
Position
11:complement(5055404..5060443)
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGVKKVSYERDTKIMNAATFTVEREDHTIGNIVRMQLHRDDNVLFAG
YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKSQFEGELAKHTRDY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagatcgttacgaacgattcgttgttccagaaggcgttaagaaggtttcg
tatgagagggatacgaagatcatgaatgcagctacatttactgttgaaagagaggaccat
acaatcgggaacattgttcgcatgcaactacatagggatgataatgttctgtttgctggg
tacaagttgcctcatcctcttcagtacaaaatcctgctccggatccaaacaacaagccag
tcctcacctatgcaggcatataaccaggctattaatgatcttgacaaggaacttgatcat
ctgaagagtcagttcgagggtgagttggccaagcacacgagggactactaa
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