Solanum stenotomum: 125843757
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Entry
125843757 CDS
T08385
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125843757
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125843757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_N4BP1_2nd
MOEP19
Motif
Other DBs
NCBI-GeneID:
125843757
NCBI-ProteinID:
XP_049378910
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All DBs
Position
11:53946353..53952274
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AA seq
613 aa
AA seq
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MNNQNHYRPPIKRFGSGSGSGGDPTAVLQPGQVHFRLLCHVSTAGGVIGNSGGLIRQLEA
QTGCRIRFEEPLPNCHERVVNIVGDSIIDRKIRISYDGSNEEVEVVEVSRAQEGLIRVYE
RVLQLEGNGGAVGCRLLAISGQIGALMGKGGVIVDGIRKSTGAKIKVLTKEQLPACAIPG
EELIQIMGVIAVVKRALVHVSRRLQVRLPAERYKDQVTSKGASHEQPADYPLDTKSSIQP
LPRNSVNHSSVAHSLSSDVDRVLNLDADSSQRKVVFRLLCSYISAGGVIGKGAHIVKALE
KDTGASIKFSTPTVRSKERVAIISSLEIRKPLYSPAQVATDRVFERSVEVSREHGHIKAG
SISARILVGPHEVKCLLDEKGIVSSDIGSVMGVEVQLLDAENAPNCAAENDKIVQIIGEH
DNVRNALIQLTGRLREMVFSSLVSEGAVPTNYSCSSRSESSKHEFGTSMPSQLNHLSSFS
SLYQTDHLGFGPNLGGPHTLLQDKFKDRLNSKMGKPVKQSMGGWKSSHGGRESGRMDENE
TASKPVVINVPKQKFGSVYGEDGSNLTRLKEISGATVILQDPGPGECDGKVIISGTPEQI
QMAQSLLQAFIFL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaaaaccactaccgtccgccgatcaaaaggttcggcagcggtagcggtagc
ggcggagatccaacagcggtacttcaaccgggtcaagttcatttccgcttactctgccac
gtcagcacagctggcggagtcatcgggaactccggaggtttaattaggcagctggaagct
caaaccgggtgcagaatccggtttgaggaaccgttaccgaattgccatgaacgggttgtg
aacatcgttggtgattcgattatagataggaaaatcaggataagctatgatgggagtaat
gaggaagttgaggtagtggaagtttctagagcacaggaaggtttgattcgggtttacgaa
agggttttgcagctggaagggaatggtggagctgttgggtgcagattgcttgcgatttct
ggtcaaattggagctttaatgggaaaaggtggtgtaattgtggatggtataaggaaaagt
acaggagctaagattaaggttttgacgaaagagcagcttccagcttgtgccatcccagga
gaagaattgattcagataatgggtgtaattgctgtggtaaagagagcattggttcatgtt
tctcggcgtcttcaagttcgcttaccagctgagagatacaaagaccaagttacttcaaaa
ggtgcatcccatgaacaacctgcggactatcctctggataccaaatcctcaatacaacct
ttgccgagaaattccgttaatcattcttcagtagcccattcattgtcatccgatgttgat
agagttctgaatctggatgctgactcttctcaaagaaaagtagtctttagattgctttgc
tcttatatctctgctggaggtgtgattggtaagggtgcccatattgtcaaagctctagag
aaagatactggagcttctataaagttttccactccaacagtacggtcaaaagagcgtgtg
gccatcatatcttcgcttgaaatccggaagcctttgtactcgcctgcacaagttgccaca
gatcgagtgtttgaaagatctgtagaagttagccgtgaacacggacacattaaggctggc
tcaataagtgcaagaatcttagttgggccgcatgaagttaaatgcctccttgatgaaaag
ggaatagtttcatcagatataggttcagtgatgggggttgaagtacagctattggatgca
gagaacgctccaaactgtgctgcagagaatgacaaaatagtgcagatcattggcgagcat
gataacgtgaggaatgcccttattcaacttactggtaggctgagggaaatggtcttttcc
agcttggtttctgaaggagcagtacctacaaactattcttgttcttcgcgctccgagagc
agtaaacatgaatttggtactagtatgccttctcagctgaatcacttgtccagcttttct
tctctttaccaaacagatcaccttggctttggaccaaatcttggtggtcctcatacattg
ttacaggacaagttcaaggatagattgaatagcaagatgggcaagccggtcaaacaaagc
atgggtggctggaagagttctcatggtggacgtgagagtggaaggatggatgagaatgag
acagcaagcaaacccgtcgtgataaatgttccaaaacaaaaatttggttctgtttatggc
gaggatggttccaatttgactcgactgaaagagatctctggagccacagttatcctacaa
gatccaggtcctggagaatgtgatggaaaggtgatcatttccggtacacctgaacagatc
cagatggcacaaagccttcttcaagccttcatcttcttgtaa
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