Solanum stenotomum: 125843815
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Entry
125843815 CDS
T08385
Name
(RefSeq) AP-2 complex subunit alpha-1-like isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125843815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125843815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125843815
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
125843815
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125843815
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
RRN3
BRE1
Motif
Other DBs
NCBI-GeneID:
125843815
NCBI-ProteinID:
XP_049378975
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Position
11:complement(6770048..6792629)
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AA seq
1019 aa
AA seq
DB search
MALSGMRGLSVFISDVRNCQNKELERFRVDKELGNIRTRFKNEKGLTPYEKKKYVWKMLY
IHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLRLAINTVRNDIVGRN
ETFQCLALTLVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLVRLFRKNPDVMN
VDSWSDRMAQLLDERDLGVVTSSMSLLVALVSNNHEEYWSCLPKCVKVLERLSRNQDVPQ
EYTYYGIPSPWLQVKAMRALQYFPTIEDPDTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQEIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFVMREELSLKIA
ILAEKFAPDLSWYVDVVLQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAALKAREYLDK
PAIHETMVKVSAYILGEYSHLLARRPGCSPKEIFSIIHEKLPTVTTSTIPILLSTYAKIL
MHTQPPDPELQNQIWAIFRKYEGCIDVEIQQRAVEYFELSKKGAALMDILSEMPKFPERQ
SSLIKKAEDTETDTADQSAIKLRAQQQNSNALVVTDQHHANGTPPVSQLGPVKVPSMSNV
DCDSVDQREAQSNGTLTVVDPQPPSSASPDLLGDLLSPLAIDGPQPAENQSNHSLSAGVE
GAAIAEEALALAPIEEQMNTVQPIGSIAERFHALCFKDSGVLYEDPYIQIGTKADWRAHH
GQLVLFLGNKNTAPLASVQAVILSPSHLRMELSLVPETIPPRAQVQCPLEVVNLRPSRDV
AVLDFSYKFGTHLVNVKLRLPAVLNKFFQPITVSAEEFFPQWRSLSGPPLKLQEVVRGVK
PMALLEMANLFNSFQLVVCPGLDPNPNNLVASTTFYSESTRAMLCLVRIETDPADRTQLR
MTVASGDPALTFELKEFVKEQLVSIPTAPWAAAPPVPPQPQPTSPPPASDPGALLAGLL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgttatctggcatgagaggattgtcggtgttcatcagcgacgttcgtaattgtcag
aacaaagaactggaacgctttcgtgttgataaagagctcggcaatattcgaactcgcttt
aagaacgaaaagggtctgacgccatatgaaaagaagaaatatgtctggaaaatgctgtat
attcatatgcttggttatgatgtggactttggtcacatggaagctgtatctctgatttct
gctccaaagtatcctgagaagcaggttggatatatagtgacatcatgtttgctcaatgag
aatcatgattttttgagattagcaattaatacagtacgcaatgacatagtcggacgcaat
gagactttccagtgtctagcgttgacattggttggaaatatcggggggagggaatttgca
gaatctctagctcctgatgttcaaaagttacttatatcaagcagttgtaggccactggtg
aggaagaaggctgcactatgtctcgtacgtctttttaggaaaaatcctgatgtcatgaat
gtagatagctggtcagatcggatggcacaactgctagatgaacgagatttaggtgttgtg
acatcttccatgagccttctagttgcattagtgtcaaataaccacgaagaatattggagt
tgtcttcccaaatgtgttaaagtattggaaaggctttcaaggaaccaagatgtaccacaa
gaatatacctactatgggatcccatctccatggctgcaggtaaaggctatgagggctcta
caatattttcctactattgaggatccagatactagaagatcattgtttgaggttttgcaa
cggatattgatgggaaccgatgtggtgaaaaatgtgaacaagaacaatgcgtcacatgct
gtcctctttgaagcgcttgctcttgtcatgcatcttgatgccgaaaaagagatgatgtct
cagtgtgttgcattgcttgggaaattcattgctgtacgtgagccaaatattcgatatctt
ggtttggaaaatatgactcggatgttgatggttacagatgtacaggaaatcattaaaaga
catcaagcacagattattacctcactgaaggatcctgatatcagtataaggagacgtgcg
cttgatttactatatggaatgtgtgatgtttcaaatgcaaaagacatagtggaagaactg
ttgcagtatcttagtacggcagagtttgtgatgcgtgaagaactgtcactcaaaattgca
attcttgcagagaaatttgctcctgatttgtcgtggtatgtagatgtcgtccttcaatta
attgacaaggctggtgattttgtcagtgatgacatttggttccgtgttgtgcaatttgtt
acaaacaatgaagatctacagccttatgcagctttgaaggccagagaatatcttgataag
cccgccattcatgaaacaatggtcaaggtcagtgcatatatccttggagaatacagccat
cttctggcaagaaggcctgggtgtagtccaaaggaaatctttagtatcattcatgagaag
ctccctactgttacgacttcaacaattcctattcttctgtcaacatatgctaagatcttg
atgcatacacagccaccagatccggagctacagaatcagatttgggcaatattcaggaag
tatgaaggctgcatcgatgtagagatacagcaacgggctgtggaatactttgagttgagt
aagaaaggtgcagctttaatggacatcttatctgaaatgccaaagttccctgagcgacag
tcgtcactgataaaaaaggctgaggatactgagactgataccgctgaccaaagtgcaatc
aagttgcgtgcacaacagcaaaattctaatgctttagtagtgacagaccaacaccatgct
aatggaactccaccagtcagccagttaggtccagtaaaagttccaagcatgagcaatgtg
gattgtgactcagtggatcaaagggaggctcagtcaaatggaactttgaccgttgtggat
cctcaacccccttcaagcgcttcgcctgatctcctgggtgatcttttaagtcctctggct
attgacggccctcagcctgctgagaaccaatctaaccatagtttgagtgctggtgttgaa
ggtgctgcaattgcggaggaggctctagcacttgcacctattgaagaacagatgaacacc
gttcagccaataggaagcattgcagaaaggtttcatgccttgtgctttaaagatagtggt
gtactatatgaggatccatacattcagattggcacaaaagcagattggcgggcacatcat
ggacaacttgtcctgttcttgggaaataagaatacggctccacttgcttcagtgcaggct
gtaatattgtctccatctcatttgaggatggaactatcattagtacctgagactattcca
ccacgtgcgcaggttcaatgcccacttgaagttgttaacctacgtccaagtagggatgtc
gctgttcttgacttctcatataagttcggaactcatttggttaatgttaaacttcgcctc
cctgctgtcttgaataagtttttccagcctatcacagtatctgcagaagaatttttccca
caatggagatcactatctgggccaccattgaagctccaagaagtggttagaggtgtaaaa
ccaatggcacttcttgaaatggcaaacttgttcaatagtttccagttggttgtgtgtcct
ggacttgatccaaatccaaataatttggttgctagcacaactttctattcagaaagtacg
cgagccatgttgtgtttggtaagaatagaaacggatccagctgatagaactcaactgcgt
atgacagttgcttctggagatcctgcactgacattcgagctgaaggagttcgttaaggaa
caattggttagtatccctacagctccttgggcagctgcaccacccgtacctccacaacct
cagccaaccagtccaccaccagcatcagatcctggagcattgcttgctggtttgctataa
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